RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 VSNL1P62760 191 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RPS15P62841 145 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TSPAN31Q12999 210 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TNK1Q13470 666 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PDE7AQ13946 482 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SMCO1Q147U7 214 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 OPCMLQ14982 345 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 EMC2Q15006 297 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RAB11BQ15907 218 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PCK2Q16822 640 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 EXOC3L2Q2M3D2 409 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 NDUFAF6Q330K2 333 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 AKIRIN2Q53H80 203 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RABGAP1LQ5R372 815 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF470Q6ECI4 717 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TXNRD3NBQ6F5E7 133 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PAMR1Q6UXH9 720 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 FAM151BQ6UXP7 276 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 IDO2Q6ZQW0 420 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 IL17RELQ6ZVW7 336 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PAQR9Q6ZVX9 377 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SSX9Q7RTT3 188 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TRPM8Q7Z2W7 1104 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RBM45Q8IUH3 476 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 UBQLNLQ8IYU4 475 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SLC22A15Q8IZD6 547 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 MCOLN2Q8IZK6 566 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF786Q8N393 782 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC17Q8N6Y2 441 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RNF148Q8N7C7 305 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM185AQ8NFB2 350 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 OR4K14Q8NGD5 310 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 OR9Q2Q8NGE9 314 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RNASE11Q8TAA1 199 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 MCOLN3Q8TDD5 553 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 HTR3CQ8WXA8 447 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 FCGR1BQ92637 280 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PSMG2Q969U7 264 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 C11orf52Q96A22 123 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 NTAN1Q96AB6 310 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SNRNP40Q96DI7 357 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SPATA33Q96N06 139 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CYP2S1Q96SQ9 504 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CDCA3Q99618 268 aaPredicted RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SPAG8Q99932 426 aaPredicted RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PELOQ9BRX2 385 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ALG12Q9BV10 488 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CALN1Q9BXU9 219 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 POTEKPQ9BYX7 375 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ANKRD60Q9BZ19 345 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TOLLIPQ9H0E2 274 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SNX25Q9H3E2 840 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CSNK1G1Q9HCP0 422 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 DNAJC4Q9NNZ3 241 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 UFSP2Q9NUQ7 469 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CMTM6Q9NX76 183 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TXNDC16Q9P2K2 825 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SEC14L3Q9UDX4 400 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ENPP5Q9UJA9 477 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RNF150Q9ULK6 438 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PLA2G4CQ9UP65 541 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 MRPS18CQ9Y3D5 142 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC42Q9Y546 428 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SLCO1B1Q9Y6L6 691 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 NISCHQ9Y2I1 1504 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 UBN2Q6ZU65 1347 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 EEA1Q15075 1411 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ARID2Q68CP9 1835 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 A0A1W2PPK0 400 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ESYT2A0FGR8 921 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 MTMR11A4FU01 709 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 VPS37CA5D8V6 355 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 C9JVG2 144 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NPIPA7E9PJI5 369 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SLC9A3R1O14745 358 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 MAGEB2O15479 319 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF264O43296 627 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 TSPAN2O60636 221 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 FCMRO60667 390 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ATP9AO75110 1047 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NDUFS6O75380 124 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 APOC1P02654 83 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CXCL10P02778 98 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CD3GP09693 182 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SBK2P0C263 348 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SLC35E2BP0CK96 405 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SLC35E2P0CK97 266 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NPIPA8P0DM63 369 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SPP1P10451 314 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF44P15621 663 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CBR1P16152 277 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 TEAD1P28347 426 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 IL12BP29460 328 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NAMPTP43490 491 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CDX1P47902 265 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 RPL34P49207 117 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 GNG10P50151 68 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 AP1S1P61966 158 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 HSF2Q03933 536 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms