RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FAM20BO75063 409 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 F10P00742 488 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 CD96P40200 585 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 GAS1P54826 345 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 NR1H2P55055 460 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-216ENST00000530004 TEKQ02763 1124 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 TUBA3CQ13748 450 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 COL28A1Q2UY09 1125 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 BICRALQ6AI39 1079 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 TUBA3EQ6PEY2 450 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 ZNF773Q6PK81 442 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 C19orf48Q6RUI8 117 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 GPALPP1Q8IXQ4 340 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 OR13C2Q8NGS9 318 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 FANK1Q8TC84 345 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 HAS2Q92819 552 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 IL4I1Q96RQ9 567 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 UTP23Q9BRU9 249 aaKnown RBP13.08□□□□□ -0.32
TTC39A-216ENST00000530004 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 METTL7AQ9H8H3 244 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 PAK1IP1Q9NWT1 392 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-216ENST00000530004 GP1BBP13224 206 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 TACR3P29371 465 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 CASRP41180 1078 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 PIGFQ07326 219 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 ST3GAL2Q16842 350 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 CYP4Z2PQ8N1L4 340 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
TTC39A-216ENST00000530004 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SAMD8Q96LT4 415 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SLC19A3Q9BZV2 496 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 ADAM19Q9H013 955 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 OR52D1Q9H346 318 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 C12orf10Q9HB07 376 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 LRFN1Q9P244 771 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 HEATR5AQ86XA9 2040 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 OR5H15A6NDH6 313 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 TP53I11O14683 189 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 PTGDSP41222 190 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 PCYT1AP49585 367 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
TTC39A-216ENST00000530004 CSNK2BP67870 215 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 ARG2P78540 354 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 QPRTQ15274 297 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SNAPC1Q16533 368 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SLC30A6Q6NXT4 461 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SATL1Q86VE3 508 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 TCEANCQ8N8B7 351 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 ZNF540Q8NDQ6 660 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 OR8J1Q8NGP2 316 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 OR4Q3Q8NH05 313 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 GPR119Q8TDV5 335 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SGTBQ96EQ0 304 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 RHNO1Q9BSD3 238 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 TAS2R10Q9NYW0 307 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 PCDHGB7Q9Y5F8 929 aa13.07□□□□□ -0.32
TTC39A-216ENST00000530004 CHCHD2Q9Y6H1 151 aaPredicted RBP13.07□□□□□ -0.32
TTC39A-216ENST00000530004 TRAV27A0A087WT01 109 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 PRKYO43930 277 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 CDC40O60508 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
TTC39A-216ENST00000530004 NEURL1O76050 574 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 RCBTB2O95199 551 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 PDGFAP04085 211 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 HTR1AP08908 422 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 NUDT6P53370 316 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 FXYD6P3P58550 94 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SLC35A2P78381 396 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 OR1C1Q15619 314 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SPINK14Q6IE38 97 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 RPL13AP3Q6NVV1 102 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 POMZP3Q6PJE2 187 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 RTL4Q6ZR62 310 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 MDGA2Q7Z553 956 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 OAFQ86UD1 273 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 OR2T33Q8NG76 320 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 OR51A7Q8NH64 312 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 PAQR8Q8TEZ7 354 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SIGLEC12Q96PQ1 595 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SLC38A2Q96QD8 506 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SECISBP2Q96T21 854 aaKnown RBP13.06□□□□□ -0.32
TTC39A-216ENST00000530004 ARHGAP9Q9BRR9 750 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
TTC39A-216ENST00000530004 DUSP21Q9H596 190 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 AMBNQ9NP70 447 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SDHAF3Q9NRP4 125 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 PLCXD1Q9NUJ7 323 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 CLN6Q9NWW5 311 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 PPP4R1LQ9P1A2 415 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms