RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TPK1Q9H3S4 243 aa16.43■□□□□ 0.22
SSRP1-204ENST00000529002 CHRNA9Q9UGM1 479 aa16.43■□□□□ 0.22
SSRP1-204ENST00000529002 FAF1Q9UNN5 650 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-204ENST00000529002 FIS1Q9Y3D6 152 aa16.43■□□□□ 0.22
SSRP1-204ENST00000529002 B4DSR2 109 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 TRIM77I1YAP6 450 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 LGI1O95970 557 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 CRYAAP02489 173 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 GSTA1P08263 222 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 CELA3BP08861 270 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 CECR9P0C854 216 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 LAMP1P11279 417 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 PRPH2P23942 346 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 GCAP28676 217 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 THBS4P35443 961 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 H3F3AP84243 136 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 TBRG1Q3YBR2 411 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 ANKRD16Q6P6B7 361 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 SHQ1Q6PI26 577 aaKnown RBP16.42■□□□□ 0.22
SSRP1-204ENST00000529002 C1orf229Q6ZS94 237 aaPredicted RBP16.42■□□□□ 0.22
SSRP1-204ENST00000529002 SPATA21Q7Z572 469 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 CDK20Q8IZL9 346 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 CLDND2Q8NHS1 167 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 NEU4Q8WWR8 484 aaPredicted RBP16.42■□□□□ 0.22
SSRP1-204ENST00000529002 TMEM234Q8WY98 164 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 TMEM186Q96B77 213 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 ZNF385AQ96PM9 386 aaKnown RBP16.42■□□□□ 0.22
SSRP1-204ENST00000529002 SERHL2Q9H4I8 314 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 MKLN1Q9UL63 735 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 EMCNQ9ULC0 261 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 SLC9A8Q9Y2E8 581 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 SPEF1Q9Y4P9 236 aa16.42■□□□□ 0.22
SSRP1-204ENST00000529002 G3V2L1 256 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 UGT2B17O75795 530 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 PDE5AO76074 875 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 C6orf47O95873 294 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 AVPP01185 164 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 IMPDH2P12268 514 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 PCMT1P22061 227 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 MAPK14Q16539 360 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 LIPMQ5VYY2 423 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 CLEC4FQ8N1N0 589 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 ZIC4Q8N9L1 334 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 ZNF563Q8TA94 476 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 AURKBQ96GD4 344 aaPredicted RBP16.41■□□□□ 0.22
SSRP1-204ENST00000529002 KATNB1Q9BVA0 655 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 RBM4Q9BWF3 364 aaKnown RBP16.41■□□□□ 0.22
SSRP1-204ENST00000529002 TUBB1Q9H4B7 451 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 GIMAP2Q9UG22 337 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 HDGFL3Q9Y3E1 203 aa16.41■□□□□ 0.22
SSRP1-204ENST00000529002 A0A096LPE4 126 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 A0A1W2PPZ6 126 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 ADRA2AP08913 450 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 EPHA1P21709 976 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 APOBEC1P41238 236 aaKnown RBP16.4■□□□□ 0.22
SSRP1-204ENST00000529002 SLC1A3P43003 542 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 ARFIP2P53365 341 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 IL1RL1Q01638 556 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 SLC17A1Q14916 467 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 ZNF141Q15928 474 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 SPDYE7PQ495Y7 208 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 GALNTL6Q49A17 601 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 TIFABQ6ZNK6 161 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 FRMD7Q6ZUT3 714 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 OR56A1Q8NGH5 318 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 OR1K1Q8NGR3 316 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 LRRC37BQ96QE4 947 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 NMUR2Q9GZQ4 415 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 SAP130Q9H0E3 1048 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 DYNLRB1Q9NP97 96 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 ESM1Q9NQ30 184 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 PARPBPQ9NWS1 579 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 TREM2Q9NZC2 230 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 TMEM181Q9P2C4 612 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 PCDHB14Q9Y5E9 798 aa16.4■□□□□ 0.22
SSRP1-204ENST00000529002 LOC105371242A0A075B767 164 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 SLC28A1O00337 649 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 LINC00032P0C843 101 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 UROSP10746 265 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 BCKDHAP12694 445 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 DDX5P17844 614 aaKnown RBP16.39■□□□□ 0.21
SSRP1-204ENST00000529002 PGM1P36871 562 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 FAHD2BQ6P2I3 314 aaPredicted RBP16.39■□□□□ 0.21
SSRP1-204ENST00000529002 LINGO2Q7L985 606 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 AAED1Q7RTV5 226 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 FAHD2AQ96GK7 314 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 METTL2AQ96IZ6 378 aaKnown RBP16.39■□□□□ 0.21
SSRP1-204ENST00000529002 ZNF696Q9H7X3 374 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 ATP6V1HQ9UI12 483 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 USP22Q9UPT9 525 aa16.39■□□□□ 0.21
SSRP1-204ENST00000529002 SPIN1Q9Y657 262 aaPredicted RBP16.39■□□□□ 0.21
SSRP1-204ENST00000529002 TMEM72A0PK05 275 aa16.38■□□□□ 0.21
SSRP1-204ENST00000529002 ZC3H12DA2A288 527 aaKnown RBP16.38■□□□□ 0.21
SSRP1-204ENST00000529002 SCAMP2O15127 329 aaKnown RBP16.38■□□□□ 0.21
SSRP1-204ENST00000529002 DNPH1O43598 174 aa16.38■□□□□ 0.21
SSRP1-204ENST00000529002 NPR2P20594 1047 aa16.38■□□□□ 0.21
SSRP1-204ENST00000529002 COL8A2P25067 703 aa16.38■□□□□ 0.21
SSRP1-204ENST00000529002 PLAURQ03405 335 aa16.38■□□□□ 0.21
SSRP1-204ENST00000529002 MSMPQ1L6U9 139 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms