RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CEACAM4O75871 244 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 CST1P01037 141 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 IL32P24001 234 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 ETV5P41161 510 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 CRATP43155 626 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 KCNJ3P48549 501 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 POU3F4P49335 361 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 TAF6P49848 677 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 SLC26A2P50443 739 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 PRELPP51888 382 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 CDH6P55285 790 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 TGFBIQ15582 683 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 CAMK4Q16566 473 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 SNAI3Q3KNW1 292 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 PDZK1Q5T2W1 519 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 LIPNQ5VXI9 398 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 DHRS11Q6UWP2 260 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 OR5AU1Q8NGC0 362 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 OR13C9Q8NGT0 318 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 SLC38A4Q969I6 547 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 MRGPRFQ96AM1 343 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 TSNARE1Q96NA8 513 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 TGM7Q96PF1 710 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 OVOL2Q9BRP0 275 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 MTIF3Q9H2K0 278 aaKnown RBP4.81□□□□□ -1.64
PCF11-202ENST00000528336 SMYD3Q9H7B4 428 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 C10orf88Q9H8K7 445 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 MCCC2Q9HCC0 563 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 CSNK1G1Q9HCP0 422 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 LYRM4Q9HD34 91 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 RAB18Q9NP72 206 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 NDE1Q9NXR1 346 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 NLGN3Q9NZ94 848 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 MTCH1Q9NZJ7 389 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 HMGXB4Q9UGU5 601 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 ADAM28Q9UKQ2 775 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 PRELID1Q9Y255 219 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 WIPI2Q9Y4P8 454 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 DUOX1Q9NRD9 1551 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 LTBP1Q14766 1721 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 MED23Q9ULK4 1368 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 SALL1Q9NSC2 1324 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 PPIAL4EA0A075B759 164 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 CHUKO15111 745 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 CALUO43852 315 aaPredicted RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 CT45A8P0DMV1 189 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 CT45A9P0DMV2 189 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 PPIAL4FP0DN26 164 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 ZNF10P21506 573 aaPredicted RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 PSMA2P25787 234 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 LAP3P28838 519 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 EVI2BP34910 448 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 CSNK1G2P78368 415 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 MS4A2Q01362 244 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 IRF8Q02556 426 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 BST2Q10589 180 aaKnown RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 ELAVL2Q12926 359 aaKnown RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 NME3Q13232 169 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 SYPL1Q16563 259 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 FAM106AQ4KMX7 169 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 CT45A2Q5DJT8 189 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 LCLAT1Q6UWP7 414 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 TMEM107Q6UX40 140 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 FRA10AC1Q70Z53 315 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 VPS36Q86VN1 386 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 LRRC6Q86X45 466 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 FAM86B1Q8N7N1 296 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 UBA3Q8TBC4 463 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 NRGNQ92686 78 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 ANKRD9Q96BM1 317 aaPredicted RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 MRPL53Q96EL3 112 aaKnown RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 WBP1Q96G27 269 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 HPDLQ96IR7 371 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 OSBPL10Q9BXB5 764 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 ADNPQ9H2P0 1102 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 RANBP3Q9H6Z4 567 aaPredicted RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 PNO1Q9NRX1 252 aaKnown RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 ADAM22Q9P0K1 906 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 LHX3Q9UBR4 397 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 ZNF346Q9UL40 294 aaKnown RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 RASD1Q9Y272 281 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 TMED7Q9Y3B3 224 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 PPIAL4AQ9Y536 164 aa4.8□□□□□ -1.64
PCF11-202ENST00000528336 TDRD15B5MCY1 1934 aaKnown RBP4.8□□□□□ -1.64
PCF11-202ENST00000528336 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 PPIAL4CA0A0B4J2A2 164 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 TRBV11-1A0A0K0K1C0 115 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 A0A1W2PPE3 182 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 WASHC1A8K0Z3 465 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 EIF3HO15372 352 aaKnown RBP eCLIP4.79□□□□□ -1.64
PCF11-202ENST00000528336 STX7O15400 261 aaKnown RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 STX11O75558 287 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 SCGNO76038 276 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 H6PDO95479 791 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 EPOP01588 193 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 ANXA4P09525 319 aaPredicted RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 PPIAL4GP0DN37 164 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 TPMTP51580 245 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 KCNK10P57789 538 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms