RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 OR51I1Q9H343 314 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 MYOZ1Q9NP98 299 aaPredicted RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 EXOSC3Q9NQT5 275 aaKnown RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 NOP53Q9NZM5 478 aaKnown RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 GIMAP2Q9UG22 337 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 KCNE5Q9UJ90 142 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 ALPK2Q86TB3 2170 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 LOC100289279A0A1B0GTE1 492 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 RNASET2O00584 256 aaKnown RBP13.81□□□□□ -0.2
CTTN-212ENST00000527962 KIAA0513O60268 411 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 ITGA5P08648 1049 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 G6PDP11413 515 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 KCNJ10P78508 379 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 EMX2Q04743 252 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 GNA13Q14344 377 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 SQLEQ14534 574 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 SMU1Q2TAY7 513 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 ANXA8L1Q5VT79 327 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 B3GLCTQ6Y288 498 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 FAM71CQ8NEG0 241 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 OR4A15Q8NGL6 344 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 MIPOL1Q8TD10 442 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 EPS8L3Q8TE67 593 aaKnown RBP13.81□□□□□ -0.2
CTTN-212ENST00000527962 SLC17A5Q9NRA2 495 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 FBXO9Q9UK97 447 aaPredicted RBP13.81□□□□□ -0.2
CTTN-212ENST00000527962 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
CTTN-212ENST00000527962 ANK3Q12955 4377 aaKnown RBP13.81□□□□□ -0.2
CTTN-212ENST00000527962 TLDC2A0PJX2 215 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 ZNF208O43345 1280 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 SKAP2O75563 359 aaPredicted RBP13.8□□□□□ -0.2
CTTN-212ENST00000527962 KRT33AO76009 404 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 UQCRC2P22695 453 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 MPGP29372 298 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 IDH2P48735 452 aaKnown RBP13.8□□□□□ -0.2
CTTN-212ENST00000527962 KHKP50053 298 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 ANXA11P50995 505 aaKnown RBP13.8□□□□□ -0.2
CTTN-212ENST00000527962 H3F3AP84243 136 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 GGTLC2Q14390 218 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 KRTAP24-1Q3LI83 254 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 IQCCQ4KMZ1 466 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 C9orf135Q5VTT2 229 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 ADGRG3Q86Y34 549 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 CMIPQ8IY22 773 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 POMGNT2Q8NAT1 580 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 OR52E4Q8NGH9 312 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 ROPN1LQ96C74 230 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 FBXO17Q96EF6 278 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 C3orf30Q96M34 536 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 C19orf24Q9BVV8 132 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 OR11A1Q9GZK7 315 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 CHODLQ9H9P2 273 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 MOV10Q9HCE1 1003 aaKnown RBP13.8□□□□□ -0.2
CTTN-212ENST00000527962 OBP2BQ9NPH6 170 aa13.8□□□□□ -0.2
CTTN-212ENST00000527962 TMED7-TICAM2A0A0A6YYA0 188 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 PRSS51A0A1B0GVH4 220 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 LOC390937A0A1W2PQ73 354 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 VSTM5A8MXK1 200 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 PDLIM1O00151 329 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 ERCC1P07992 297 aaPredicted RBP13.79□□□□□ -0.2
CTTN-212ENST00000527962 OR12D1P0DN82 309 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 APEHP13798 732 aaKnown RBP13.79□□□□□ -0.2
CTTN-212ENST00000527962 CCNA2P20248 432 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 POLR2HP52434 150 aaKnown RBP13.79□□□□□ -0.2
CTTN-212ENST00000527962 MAPK14Q16539 360 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 GPAT3Q53EU6 434 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 FAM120AOSQ5T036 256 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 AP1ARQ63HQ0 302 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 OR4F3Q6IEY1 312 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 TYW3Q6IPR3 259 aaKnown RBP13.79□□□□□ -0.2
CTTN-212ENST00000527962 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 CLECL1Q8IZS7 167 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
CTTN-212ENST00000527962 WDR31Q8NA23 367 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 OR8J2Q8NGG1 315 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.79□□□□□ -0.28e-7■■■■■ 32.1
CTTN-212ENST00000527962 MECRQ9BV79 373 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 SAP130Q9H0E3 1048 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 SERHL2Q9H4I8 314 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 SLC7A10Q9NS82 523 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 ASIC5Q9NY37 505 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 TMED7Q9Y3B3 224 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 FLVCR1Q9Y5Y0 555 aa13.79□□□□□ -0.2
CTTN-212ENST00000527962 CENPVL1A0A0U1RR11 272 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 CRYAAP02489 173 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 NTF4P34130 210 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 CHI3L1P36222 383 aaPredicted RBP13.78□□□□□ -0.2
CTTN-212ENST00000527962 SERPINF1P36955 418 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 NR4A2P43354 598 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 TXNL4AP83876 142 aaKnown RBP13.78□□□□□ -0.2
CTTN-212ENST00000527962 CARTPTQ16568 116 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 TNFAIP8L2Q6P589 184 aaPredicted RBP13.78□□□□□ -0.2
CTTN-212ENST00000527962 PAQR6Q6TCH4 344 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 ZCCHC23Q6ZST2 131 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 SLC46A3Q7Z3Q1 461 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms