RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 KRT36O76013 467 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 GADD45GO95257 159 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 ACTL6AO96019 429 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 CST1P01037 141 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 PNMTP11086 282 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 ZNF708P17019 499 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 CBLP22681 906 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 PTGS2P35354 604 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 CLDN15P56746 228 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
CD44-224ENST00000526669 EGR4Q05215 589 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 TRAM2Q15035 370 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 IGFBP7Q16270 282 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 EXOC3L2Q2M3D2 409 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 NHSL2Q5HYW2 709 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 OR2T5Q6IEZ7 315 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
CD44-224ENST00000526669 TBPL2Q6SJ96 375 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 GGNQ86UU5 652 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 PAPD5Q8NDF8 572 aaKnown RBP12.34□□□□□ -0.43
CD44-224ENST00000526669 OR2T29Q8NH02 315 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 POP5Q969H6 163 aaKnown RBP12.34□□□□□ -0.43
CD44-224ENST00000526669 DDIT4LQ96D03 193 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 ZNF347Q96SE7 839 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 COQ10BQ9H8M1 238 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 NMNAT1Q9HAN9 279 aaPredicted RBP12.34□□□□□ -0.43
CD44-224ENST00000526669 C12orf10Q9HB07 376 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 SH3BGRL2Q9UJC5 107 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 AP4S1Q9Y587 144 aa12.34□□□□□ -0.43
CD44-224ENST00000526669 ZNF462Q96JM2 2506 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 A8MVM7 634 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 KDM4EB2RXH2 506 aaPredicted RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 LRRN3E7EW58 273 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 GNGT2O14610 69 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 CXCL13O43927 109 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 RPS5P46782 204 aaKnown RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 EIF1AXP47813 144 aaKnown RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 IST1P53990 364 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 OR2B6P58173 313 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 MRPL49Q13405 166 aaKnown RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 SEC23BQ15437 767 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 CTU2Q2VPK5 515 aaKnown RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 WLSQ5T9L3 541 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 HBMQ6B0K9 141 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 ZNF585AQ6P3V2 769 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 LINC00114Q6XXX2 140 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 AMIGO2Q86SJ2 522 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 ST6GALNAC3Q8NDV1 305 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 OR2V1Q8NHB1 315 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 SLC25A43Q8WUT9 341 aaPredicted RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 TMEM239Q8WW34 195 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 LRTOMTQ8WZ04 291 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 DUS3LQ96G46 650 aaKnown RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 ZNF845Q96IR2 970 aaPredicted RBP12.33□□□□□ -0.44
CD44-224ENST00000526669 ADGRG7Q96K78 797 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 DHRS1Q96LJ7 313 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 TUBA1CQ9BQE3 449 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 YY1AP1Q9H869 796 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 STOML1Q9UBI4 398 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 U3KQV3 271 aa12.33□□□□□ -0.44
CD44-224ENST00000526669 CACNA1CQ13936 2221 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 A0A087WUU8 490 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 IGHV3-15A0A0B4J1V0 119 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 H3BNX3 289 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 ZNF208O43345 1280 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 AHSA1O95433 338 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 THRBP10828 461 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 IMPDH2P12268 514 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 KLK2P20151 261 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 ELF3P78545 371 aaPredicted RBP12.32□□□□□ -0.44
CD44-224ENST00000526669 RBPJQ06330 500 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 MYBPHQ13203 477 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 OR7A5Q15622 319 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 GXYLT1Q4G148 440 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 EMC4Q5J8M3 183 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 HMBOX1Q6NT76 420 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 PODNL1Q6PEZ8 512 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 C3P1Q6ZMU1 363 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 TMEM179BQ7Z7N9 219 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 C10orf53Q8N6V4 93 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 OR10D3Q8NH80 312 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 SLC7A13Q8TCU3 470 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 STMN2Q93045 179 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 TAAR8Q969N4 342 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 MIB2Q96AX9 1013 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 SLC25A36Q96CQ1 311 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 MPP4Q96JB8 637 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 ALPK1Q96QP1 1244 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms