RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HPCAL1P37235 193 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 XCR1P46094 333 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 MRPL19P49406 292 aaKnown RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 XKP51811 444 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ZNF41P51814 821 aaPredicted RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 POLR2JP52435 117 aaKnown RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 RAD23AP54725 363 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 EMP2P54851 167 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 KCNK10P57789 538 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 BTG2P78543 158 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TNFRSF17Q02223 184 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 KLC1Q07866 573 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 STX4Q12846 297 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 NSDHLQ15738 373 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 BAK1Q16611 211 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 MAJINQ3KP22 176 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ZNF585BQ52M93 769 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 KLHL22Q53GT1 634 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 FAM69AQ5T7M9 428 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ANXA8L1Q5VT79 327 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 LCN10Q6JVE6 187 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 SLC48A1Q6P1K1 146 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 MOB3CQ70IA8 216 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TICAM1Q8IUC6 712 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ARMC8Q8IUR7 673 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 OR4N5Q8IXE1 308 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 RIMKLAQ8IXN7 391 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ZNF595Q8IYB9 648 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 CLIP4Q8N3C7 705 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 KRTCAP2Q8N6L1 136 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 PLPP5Q8NEB5 264 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 OR7A2PQ8NGA2 310 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 NUDCD2Q8WVJ2 157 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 METTL21AQ8WXB1 218 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 VPS33AQ96AX1 596 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 OTULINQ96BN8 352 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 PPCDCQ96CD2 204 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TEX37Q96LM6 180 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ZNF578Q96N58 590 aaPredicted RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 OR1F2PQ96R84 312 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 OR52E6Q96RD3 313 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 BBS4Q96RK4 519 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 CCDC106Q9BWC9 280 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 NMUR2Q9GZQ4 415 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 SLC26A1Q9H2B4 701 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ZNF385DQ9H6B1 395 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 SLC35C2Q9NQQ7 365 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 GIMAP4Q9NUV9 329 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ATAD3AQ9NVI7 634 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TEX10Q9NXF1 929 aaPredicted RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 TAS2R7Q9NYW3 318 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ATP6V1HQ9UI12 483 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 NXT1Q9UKK6 140 aaKnown RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 KLK13Q9UKR3 277 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 CES1P1Q9UKY3 287 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 EXO1Q9UQ84 846 aaKnown RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 NEUROG3Q9Y4Z2 214 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ZNF780BQ9Y6R6 833 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 MUC6Q6W4X9 2439 aa4.09□□□□□ -1.76
USP48-211ENST00000526044 IGLV3-12A0A075B6K2 115 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 A0A0U1RQK1 487 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PRSS51A0A1B0GVH4 220 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 A0A1W2PP18 115 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 A0A1W2PRB8 838 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ZNF320A2RRD8 509 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CCT8L1PA6NM43 557 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 A8MV72 311 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 MYO1GB0I1T2 1018 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 IDSB3KWA1 339 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 C21orf140B9A014 251 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 TEX22C9J3V5 150 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 TAF4O00268 1085 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SCAMP2O15127 329 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 CFLARO15519 480 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 LDB3O75112 727 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 JRKO75564 520 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PRKRAO75569 313 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 CDC123O75794 336 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 SNX4O95219 450 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CPSF4O95639 269 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 AIFM1O95831 613 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 IFNA16P05015 189 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CLEC3BP05452 202 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SLC35E2P0CK97 266 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 C8orf89P0DMQ9 161 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 TFPIP10646 304 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 LAMP1P11279 417 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SFTPCP11686 197 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CPMP14384 443 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 NT5EP21589 574 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PTPN4P29074 926 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 IL12AP29459 219 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 GCH1P30793 250 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 RYKP34925 604 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 DLSTP36957 453 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 FEN1P39748 380 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 TRPC1P48995 793 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 HNRNPFP52597 415 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 CDH15P55291 814 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 DSCR9P59020 149 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms