RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 CD8B2A6NJW9 211 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 PMS2P2O95744 297 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 SUCLG1P53597 346 aaKnown RBP16.82■□□□□ 0.28
PTPRK-218ENST00000525459 PIN1Q13526 163 aaPredicted RBP16.82■□□□□ 0.28
PTPRK-218ENST00000525459 C3AR1Q16581 482 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 SGCBQ16585 318 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 B3GNT6Q6ZMB0 384 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 GDF7Q7Z4P5 450 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 ADGRE4PQ86SQ3 457 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 ZDHHC21Q8IVQ6 265 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 ATP6V1C2Q8NEY4 427 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 OR10D3Q8NH80 312 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 ZHX1-C8orf76Q96EF9 292 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 HS6ST2Q96MM7 605 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 SEPHS2Q99611 448 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 ZNF426Q9BUY5 554 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 PRR14Q9BWN1 585 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 YY1AP1Q9H869 796 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 CALHM2Q9HA72 323 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 NDUFAF4Q9P032 175 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 TINAGQ9UJW2 476 aa16.82■□□□□ 0.28
PTPRK-218ENST00000525459 MCTS1Q9ULC4 181 aaKnown RBP16.82■□□□□ 0.28
PTPRK-218ENST00000525459 A0A0J9YW62 118 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 TCRBV3S1A0A5B6 114 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 HTR3EA5X5Y0 456 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 TNFSF11O14788 317 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 OR2T1O43869 369 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 NPIPB7O75200 414 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 SEMA7AO75326 666 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 WISP1O95388 367 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 AHSA1O95433 338 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 PLA2G2AP14555 144 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 IDUAP35475 653 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 EIF1AXP47813 144 aaKnown RBP16.81■□□□□ 0.28
PTPRK-218ENST00000525459 CLDN15P56746 228 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 SMIM11AP58511 58 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 RAC3P60763 192 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 NSUN5P2Q63ZY6 315 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 TMEM211Q6ICI0 200 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 TTC33Q6PID6 262 aaPredicted RBP16.81■□□□□ 0.28
PTPRK-218ENST00000525459 LINC00114Q6XXX2 140 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 TMPPEQ6ZT21 453 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 OR6S1Q8NH40 331 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 RELTQ969Z4 430 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 PIP5K1AQ99755 562 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 TUBA1CQ9BQE3 449 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 COQ10BQ9H8M1 238 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 ALKBH4Q9NXW9 302 aa16.81■□□□□ 0.28
PTPRK-218ENST00000525459 CLCA1A8K7I4 914 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 SULT2B1O00204 365 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 SYNGR4O95473 234 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 IGF2P01344 180 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 CCNA2P20248 432 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 DIO1P49895 249 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 CARD18P57730 90 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 MYBPHQ13203 477 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 MFSD13AQ14CX5 517 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 TRAM2Q15035 370 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 C4orf17Q53FE4 359 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 C1orf140Q5VVS0 124 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 UTP4Q969X6 686 aaKnown RBP16.8■□□□□ 0.28
PTPRK-218ENST00000525459 RSRC1Q96IZ7 334 aaKnown RBP16.8■□□□□ 0.28
PTPRK-218ENST00000525459 ZFP3Q96NJ6 502 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 TAPBPLQ9BX59 468 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 KLHL4Q9C0H6 718 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 HIVEP3Q5T1R4 2406 aa16.8■□□□□ 0.28
PTPRK-218ENST00000525459 MED12LQ86YW9 2145 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 J3QKU1 62 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 hCG_2039718K7EN88 272 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 ZNHIT1O43257 154 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 EIF1BO60739 113 aaKnown RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 PRSS23O95084 383 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 SHC1P29353 583 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 UQCRFS1P47985 274 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 EIF2S3LQ2VIR3 472 aaKnown RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 FAM69AQ5T7M9 428 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 TSPYL5Q86VY4 417 aaPredicted RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 ADGRG5Q8IZF4 528 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 PIK3C3Q8NEB9 887 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 PRR7Q8TB68 274 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 TRIB1Q96RU8 372 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 TM9SF2Q99805 663 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 OR11A1Q9GZK7 315 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 CLCF1Q9UBD9 225 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 TRAV36DV7A0A075B6V5 113 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 A0A1W2PRQ8 180 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 MBD3L4A6NDZ8 208 aaPredicted RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 MBD3L3A6NE82 208 aaPredicted RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 MBD3L5A6NJ08 208 aaPredicted RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 SLC22A20A6NK97 555 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 CXCL13O43927 109 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 LYPD3O95274 346 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 THY1P04216 161 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 H1F0P07305 194 aaKnown RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 SLC35A1P78382 337 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 DGCR6Q14129 220 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 GK3PQ14409 553 aa16.79■□□□□ 0.28
PTPRK-218ENST00000525459 ZNF239Q16600 458 aaKnown RBP16.79■□□□□ 0.28
PTPRK-218ENST00000525459 IQCCQ4KMZ1 466 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms