RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CGB2Q6NT52 195 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 PAMR1Q6UXH9 720 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 WFDC8Q8IUA0 241 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 GABRG1Q8N1C3 465 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZHX1-C8orf76Q96EF9 292 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 CPPED1Q9BRF8 314 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 SIKE1Q9BRV8 207 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 ARMC7Q9H6L4 198 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 FANCFQ9NPI8 374 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 GPR52Q9Y2T5 361 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF716A6NP11 495 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZNF724A8MTY0 619 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZNF208O43345 1280 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 KLF4O43474 513 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 TPST1O60507 370 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 GOSR1O95249 250 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 IGHV3-9P01782 118 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 RAF1P04049 648 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 GPX2P18283 190 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 FKBP2P26885 142 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 AQP1P29972 269 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 OR3A2P47893 321 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 ARFIP2P53365 341 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 MTPNP58546 118 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 NFYCQ13952 458 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 CEACAM7Q14002 265 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 SCARB2Q14108 478 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 SFRP5Q5T4F7 317 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRAMEF8Q5VWM4 474 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRAMEF7Q5VXH5 474 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 ABLIM2Q6H8Q1 611 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 REEP3Q6NUK4 255 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 GALNT5Q7Z7M9 940 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 COMTD1Q86VU5 262 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZNF100Q8IYN0 542 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 NINJ1Q92982 152 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 S100PBPQ96BU1 408 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 TACO1Q9BSH4 297 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRR14Q9BWN1 585 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 TRAPPC4Q9Y296 219 aa11.39□□□□□ -0.59
TRAPPC4-205ENST00000525079 ATE1O95260 518 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 ETS2P15036 469 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 PPP3CBP16298 524 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 PSMB1P20618 241 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC6A2P23975 617 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 IL32P24001 234 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 NTF4P34130 210 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 IDUAP35475 653 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC35A1P78382 337 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 KEAP1Q14145 624 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 CAPRIN1Q14444 709 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 OR7A5Q15622 319 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 ADRM1Q16186 407 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZSWIM7Q19AV6 140 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 HSP90B2PQ58FF3 399 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 METTL21CQ5VZV1 264 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 DPP10Q8N608 796 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 STEAP2Q8NFT2 490 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 PIGXQ8TBF5 258 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 ANKRD27Q96NW4 1050 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 CGREF1Q99674 301 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 NAA11Q9BSU3 229 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 UBTD1Q9HAC8 227 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 EMC3Q9P0I2 261 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 EDARQ9UNE0 448 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 CORO2BQ9UQ03 480 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 NOSIPQ9Y314 301 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 GMEB1Q9Y692 573 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 SPG11Q96JI7 2443 aa11.38□□□□□ -0.59
TRAPPC4-205ENST00000525079 CCDC168Q8NDH2 2452 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 IGKV3D-15A0A087WSY6 115 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 FBP2O00757 339 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 DNPH1O43598 174 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 LYZL6O75951 148 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 AKR7A3O95154 331 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 PLAUP00749 431 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 LOXP28300 417 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 ADSLP30566 484 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRKAR1BP31321 381 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 H3F3AP84243 136 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 ITGADQ13349 1161 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 PDK3Q15120 406 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 CYP51A1Q16850 503 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 OTUD3Q5T2D3 398 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 Q6ZT83 130 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 BHLHA15Q7RTS1 189 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 KRT73Q86Y46 540 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 UBE2J2Q8N2K1 259 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 TMEM99Q8N816 258 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 HIPK4Q8NE63 616 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 KISS1RQ969F8 398 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 C3orf49Q96BT1 292 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 PLPPR2Q96GM1 343 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms