RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, human

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-204	ENST00000524926	CCL4	P13236	92 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	CPE	P16870	476 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	MPL	P40238	635 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	TOMM34	Q15785	309 aa	Predicted RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	KLHL36	Q8N4N3	616 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	OR6Q1	Q8NGQ2	317 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	OR4K13	Q8NH42	304 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	TBX5	Q99593	518 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ARHGAP9	Q9BRR9	750 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ERVK13-1	Q9NX77	482 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	FBXL4	Q9UKA2	621 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	MPDZ	O75970	2070 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	OR6C70	A6NIJ9	312 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	SLC22A31	A6NKX4	558 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	EIF4E2	O60573	245 aa	Known RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	LDOC1	O95751	146 aa	Predicted RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ONECUT2	O95948	504 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	IGHA1	P01876	353 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	GYPB	P06028	91 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	HIST1H1C	P16403	213 aa	Known RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ZNF28	P17035	718 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ENDOU	P21128	410 aa	Known RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	CRYBB2	P43320	205 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ZNF791	Q3KP31	576 aa	Predicted RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	SDR9C7	Q8NEX9	313 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	TMEM43	Q9BTV4	400 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	HMG20A	Q9NP66	347 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	NANS	Q9NR45	359 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	CHRNA9	Q9UGM1	479 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	SSR3	Q9UNL2	185 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	ADAM18	Q9Y3Q7	739 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	NCOR1	O75376	2440 aa		13.94	□□□□□ -0.18
BEST1-204	ENST00000524926	TRBV11-1	A0A0K0K1C0	115 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	C12orf71	A8MTZ7	269 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ZFP36L1	Q07352	338 aa	Known RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ZNF846	Q147U1	533 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	FAM69B	Q5VUD6	431 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	LINC00299	Q6ZSB3	139 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ACBD7	Q8N6N7	88 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ZFP41	Q8N8Y5	198 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	RHBDD1	Q8TEB9	315 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	UFD1	Q92890	307 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	WDR77	Q9BQA1	342 aa	Predicted RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	KLHL1	Q9NR64	748 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	TOR4A	Q9NXH8	423 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	FADS1	O60427	444 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	KLK3	P07288	261 aa	Predicted RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	MRPL3	P09001	348 aa	Known RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	PGC	P20142	388 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	CXCR1	P25024	350 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	PRPS1	P60891	318 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	EGR4	Q05215	589 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ZNF74	Q16587	644 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	DPY19L2P2	Q6ZN68	376 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	GDPGP1	Q6ZNW5	385 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	BMPER	Q8N8U9	685 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	OR5W2	Q8NH69	310 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	DUSP19	Q8WTR2	217 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	S100Z	Q8WXG8	99 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	KISS1R	Q969F8	398 aa	Predicted RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	TRMT61A	Q96FX7	289 aa	Known RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	MOGAT1	Q96PD6	335 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ASPN	Q9BXN1	380 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	ADAM19	Q9H013	955 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	MMP27	Q9H306	513 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	RXFP3	Q9NSD7	469 aa		13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	GPN3	Q9UHW5	284 aa	Predicted RBP	13.93	□□□□□ -0.18
BEST1-204	ENST00000524926	CFAP54	Q96N23	3096 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	METTL15	A6NJ78	407 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	ZNF354A	O60765	605 aa	Predicted RBP	13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	IDUA	P35475	653 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	FBXW4	P57775	412 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	ERVK-25	P63136	954 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	PSPH	P78330	225 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	CBFB	Q13951	182 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	ANGPT1	Q15389	498 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	MRPL14	Q6P1L8	145 aa	Known RBP	13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	OR10H4	Q8NGA5	316 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	MOSPD2	Q8NHP6	518 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	NUBPL	Q8TB37	319 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	KTI12	Q96EK9	354 aa	Predicted RBP	13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	C1GALT1C1	Q96EU7	318 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	DTNBP1	Q96EV8	351 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	ZNF649	Q9BS31	505 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	WDR12	Q9GZL7	423 aa	Known RBP	13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	SLC26A1	Q9H2B4	701 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	ISYNA1	Q9NPH2	558 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	AKIP1	Q9NQ31	210 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	FBXO8	Q9NRD0	319 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	DAPL1	A0PJW8	107 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	HTR3E	A5X5Y0	456 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	CCDC182	A6NF36	153 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926		J3QRE1	110 aa		13.92	□□□□□ -0.18
BEST1-204	ENST00000524926	PLD2	O14939	933 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms