RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KLF11O14901 512 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 AK1P00568 194 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 OR12D1P0DN82 309 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 PRPS1L1P21108 318 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 PGM1P36871 562 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 NR4A2P43354 598 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 XKR7Q5GH72 579 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 ANKS4BQ8N8V4 417 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 RAB8BQ92930 207 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 SORCS2Q96PQ0 1159 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 ZNF350Q9GZX5 532 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 EXD2Q9NVH0 621 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 AMDHD2Q9Y303 409 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 HDGFL3Q9Y3E1 203 aa22.68■■□□□ 1.22
PVT1-219ENST00000523427 IGHV4-61A0A0C4DH41 118 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 ANKRD28O15084 1053 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 TGFAP01135 160 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 HNF1AP20823 631 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 THBS2P35442 1172 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 SLC16A1P53985 500 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 TSPO2Q5TGU0 170 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 OR4F3Q6IEY1 312 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 TNFAIP8L2Q6P589 184 aaPredicted RBP22.67■■□□□ 1.22
PVT1-219ENST00000523427 GRINAQ7Z429 371 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 ADGRG3Q86Y34 549 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 TUBGCP3Q96CW5 907 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 TMEM181Q9P2C4 612 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 WDR45Q9Y484 360 aa22.67■■□□□ 1.22
PVT1-219ENST00000523427 CLDN24A6NM45 220 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 VWC2LB2RUY7 222 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 NPHS1O60500 1241 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 G6PDP11413 515 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 IDH2P48735 452 aaKnown RBP22.66■■□□□ 1.22
PVT1-219ENST00000523427 PRPS1P60891 318 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 TGFBR3Q03167 851 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 MST1LQ2TV78 715 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 KLHL24Q6TFL4 600 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 SLC46A3Q7Z3Q1 461 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 RIMKLAQ8IXN7 391 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 ZG16BQ96DA0 208 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 PARPBPQ9NWS1 579 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 SLC35A3Q9Y2D2 325 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 FLVCR1Q9Y5Y0 555 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 SVEP1Q4LDE5 3571 aa22.66■■□□□ 1.22
PVT1-219ENST00000523427 PDLIM1O00151 329 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 SNRPD2P62316 118 aaKnown RBP22.65■■□□□ 1.22
PVT1-219ENST00000523427 HIKESHIQ53FT3 197 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 ATAD3BQ5T9A4 648 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 TYW3Q6IPR3 259 aaKnown RBP22.65■■□□□ 1.22
PVT1-219ENST00000523427 OR4A15Q8NGL6 344 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 DCTN4Q9UJW0 460 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 SLC9A8Q9Y2E8 581 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 ARFGEF3Q5TH69 2177 aa22.65■■□□□ 1.22
PVT1-219ENST00000523427 TMED7-TICAM2A0A0A6YYA0 188 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 DNPH1O43598 174 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 CPSF4O95639 269 aaKnown RBP22.64■■□□□ 1.21
PVT1-219ENST00000523427 SLC35A1P78382 337 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 SWI5Q1ZZU3 235 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 LIPNQ5VXI9 398 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 EMBQ6PCB8 327 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 VHLLQ6RSH7 139 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 SPATA19Q7Z5L4 167 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 ANKRD46Q86W74 232 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 C17orf78Q8N4C9 275 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 ARFGAP2Q8N6H7 521 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 NAA11Q9BSU3 229 aaPredicted RBP22.64■■□□□ 1.21
PVT1-219ENST00000523427 ZDHHC2Q9UIJ5 367 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 PCDHGB4Q9UN71 923 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 TMED7Q9Y3B3 224 aa22.64■■□□□ 1.21
PVT1-219ENST00000523427 ANK2Q01484 3957 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 TLDC2A0PJX2 215 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 NDUFS8O00217 210 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 AP3D1O14617 1153 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 WNT11O96014 354 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 IMPDH2P12268 514 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 GPAT3Q53EU6 434 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 FAM71CQ8NEG0 241 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 C1orf162Q8NEQ5 155 aaPredicted RBP22.63■■□□□ 1.21
PVT1-219ENST00000523427 CNOT9Q92600 299 aaKnown RBP22.63■■□□□ 1.21
PVT1-219ENST00000523427 ROPN1LQ96C74 230 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 PPP1R36Q96LQ0 422 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 KCNS3Q9BQ31 491 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 SLC17A7Q9P2U7 560 aa22.63■■□□□ 1.21
PVT1-219ENST00000523427 TMEM72A0PK05 275 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 LRP5LA4QPB2 252 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 SERPINF1P36955 418 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 CLK1P49759 484 aaKnown RBP22.62■■□□□ 1.21
PVT1-219ENST00000523427 KCNJ10P78508 379 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 H3F3AP84243 136 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 SQLEQ14534 574 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 CR1LQ2VPA4 569 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 HOMEZQ8IX15 550 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 DDIT4LQ96D03 193 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.62■■□□□ 1.21
PVT1-219ENST00000523427 TRAPPC4Q9Y296 219 aa22.62■■□□□ 1.21
PVT1-219ENST00000523427 LOC390937A0A1W2PQ73 354 aa22.61■■□□□ 1.21
PVT1-219ENST00000523427 SPAG7O75391 227 aa22.61■■□□□ 1.21
PVT1-219ENST00000523427 KRT33AO76009 404 aa22.61■■□□□ 1.21
PVT1-219ENST00000523427 MPGP29372 298 aa22.61■■□□□ 1.21
PVT1-219ENST00000523427 ARRB2P32121 409 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms