RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 LHPPQ9H008 270 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 MCCC2Q9HCC0 563 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 KRCC1Q9NPI7 259 aaPredicted RBP13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 SCOCQ9UIL1 159 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 TMED7Q9Y3B3 224 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 ACACAQ13085 2346 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 PINLYPA6NC86 204 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 WDPCPO95876 746 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 ENDOUP21128 410 aaKnown RBP13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 CRHBPP24387 322 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 SLC9A3P48764 834 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 CDC42P60953 191 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 BLMHQ13867 455 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 SLC35F1Q5T1Q4 408 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 ABHD17BQ5VST6 288 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 SLC27A4Q6P1M0 643 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 PTCHD4Q6ZW05 846 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 GRINAQ7Z429 371 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 TSPAN14Q8NG11 270 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 RHOXF1Q8NHV9 184 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 POC1BQ8TC44 478 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 NXPE2Q96DL1 559 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 FER1L6-AS2Q96M78 137 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 BATF3Q9NR55 127 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 GPR83Q9NYM4 423 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 DNAJC27Q9NZQ0 273 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 LRFN1Q9P244 771 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 ENOPH1Q9UHY7 261 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 CDH10Q9Y6N8 788 aa13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 URB1O60287 2271 aaKnown RBP13.65□□□□□ -0.22
CSGALNACT1-211ENST00000522854 PIEZO1Q92508 2521 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 H3BML4 177 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TLX3O43711 291 aaPredicted RBP13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TLX2O43763 284 aaPredicted RBP13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 PTP4A3O75365 173 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 NEURL1O76050 574 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 PEPDP12955 493 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 EEF1B2P24534 225 aaKnown RBP13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 RFC3P40938 356 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 MASP1P48740 699 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ZNF41P51814 821 aaPredicted RBP13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 POLR2HP52434 150 aaKnown RBP13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 NUP107P57740 925 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TUBA3CQ13748 450 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 PLPPR5Q32ZL2 321 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 BROXQ5VW32 411 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TUBA3EQ6PEY2 450 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 RTL4Q6ZR62 310 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 OR4K17Q8NGC6 315 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ARL5BQ96KC2 179 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 FRMD6Q96NE9 622 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 UBQLN3Q9H347 655 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 CPNE5Q9HCH3 593 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 HHATLQ9HCP6 504 aa13.64□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 HTR1AP08908 422 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 RFPL3SP0C7P2 107 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 MVKQ03426 396 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SNAPC1Q16533 368 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ZNF74Q16587 644 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 PLCZ1Q86YW0 608 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 FADS6Q8N9I5 356 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 MOSPD2Q8NHP6 518 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 HDAC2Q92769 488 aaKnown RBP13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SLC25A36Q96CQ1 311 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 IP6K3Q96PC2 410 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 PTDSS2Q9BVG9 487 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 FAM117AQ9C073 453 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SDHAF3Q9NRP4 125 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TMEM5Q9Y2B1 443 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 BSNQ9UPA5 3926 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ANKRD11Q6UB99 2663 aaPredicted RBP13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 IGLV3-32A0A0A0MS00 114 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 MCIDASD6RGH6 385 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 BLOC1S5-TXNDC5H3BN57 136 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 KLK10O43240 276 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ENTPD6O75354 484 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 OR7A10O76100 309 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 PPP1R3DO95685 299 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 P04436 131 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 CCL11P51671 97 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SMSP52788 366 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SNTA1Q13424 505 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ZBED5Q49AG3 693 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 JMJD6Q6NYC1 403 aaPredicted RBP13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 OSTF1Q92882 214 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 C1GALT1C1Q96EU7 318 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SGCZQ96LD1 299 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 TMEM43Q9BTV4 400 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 IFT27Q9BW83 186 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 KLHL1Q9NR64 748 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 WASF3Q9UPY6 502 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 ADAM18Q9Y3Q7 739 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 CSAG2Q9Y5P2 127 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 HSPE1-MOB4S4R3N1 261 aa13.63□□□□□ -0.23
CSGALNACT1-211ENST00000522854 FAM183AA6NL82 134 aa13.62□□□□□ -0.23
CSGALNACT1-211ENST00000522854 BHLHE40O14503 412 aa13.62□□□□□ -0.23
CSGALNACT1-211ENST00000522854 SLC25A12O75746 678 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms