RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 RAB27BO00194 218 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 MGST3O14880 152 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 ADAMDEC1O15204 470 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 RRP9O43818 475 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 FADS1O60427 444 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 INMTO95050 263 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 IPO7O95373 1038 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 WISP3O95389 354 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 SLU7O95391 586 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 KRT14P02533 472 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 FGGP02679 453 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 IL6RP08887 468 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 DHRS4L1P0CG22 281 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 PORP16435 677 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF17P17021 662 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 COX5AP20674 150 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 IGHV1-2P23083 117 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CXCR5P32302 372 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 KRT20P35900 424 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 LIPAP38571 399 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 PTDSS1P48651 473 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 PRKAG1P54619 331 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CCNIQ14094 377 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 EFR3AQ14156 821 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 TRIP10Q15642 601 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF628Q5EBL2 1059 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 SPANXN3Q5MJ09 141 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 HBMQ6B0K9 141 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 SULT1C3Q6IMI6 304 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF544Q6NX49 715 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 SLC48A1Q6P1K1 146 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 LRRC70Q7Z2Q7 622 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 MARCH3Q86UD3 253 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 ZC3HC1Q86WB0 502 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 MYLK4Q86YV6 388 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 TXLNBQ8N3L3 684 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 TCAIMQ8N3R3 496 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 SVOPLQ8N434 492 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 NAT8LQ8N9F0 302 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 OR2V1Q8NHB1 315 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 UBE2E3Q969T4 207 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 MRPL24Q96A35 216 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 MTBPQ96DY7 904 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 VSTM2LQ96N03 204 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CENPKQ9BS16 269 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 TRMOQ9BU70 441 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 RBM4Q9BWF3 364 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 ANKZF1Q9H8Y5 726 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CAB39LQ9H9S4 337 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 SAYSD1Q9NPB0 183 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 PPANQ9NQ55 473 aaKnown RBP5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CD274Q9NZQ7 290 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CES1P1Q9UKY3 287 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 CFL2Q9Y281 166 aa5.5□□□□□ -1.53
VPS13B-211ENST00000522802 NPIPA5A0A0B4J1W7 369 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 GOLGA6L10A0A0M3HER8 536 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 GOLGA6L10A6NI86 522 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 OR5H1A6NKK0 313 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 LINC00473A8K010 186 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 NPIPA7E9PJI5 369 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 ATP6V1G2-DDX39BF2Z307 99 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 TRIM77I1YAP6 450 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 M0R1B8 84 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 RAD51DO75771 328 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 NXPH3O95157 252 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 TACSTD2P09758 323 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 NPIPA8P0DM63 369 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 GGT1P19440 569 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 PSMA4P25789 261 aaKnown RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 PNLIPRP2P54317 469 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 DVL1P1P54792 670 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 CUL3Q13618 768 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 PLAC9Q5JTB6 97 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 TIMM23BQ5SRD1 257 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 FAM219BQ5XKK7 198 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 APOOLQ6UXV4 268 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 Q6ZT83 130 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 SLC44A2Q8IWA5 706 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 IZUMO1Q8IYV9 350 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 SPARTQ8N0X7 666 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 RNF10Q8N5U6 811 aaKnown RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 OR52N5Q8NH56 324 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF418Q8TF45 676 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 DUSP19Q8WTR2 217 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 KLHL29Q96CT2 875 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 MUCL1Q96DR8 90 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 CNRIP1Q96F85 164 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 CFAP36Q96G28 342 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 RADILQ96JH8 1075 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 RNF145Q96MT1 663 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 SLC6A7Q99884 636 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 PKP2Q99959 881 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 INPP5KQ9BT40 448 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 MRPL1Q9BYD6 325 aaKnown RBP5.49□□□□□ -1.53
VPS13B-211ENST00000522802 DERL2Q9GZP9 239 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 PTGES2Q9H7Z7 377 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 PRODH2Q9UF12 536 aa5.49□□□□□ -1.53
VPS13B-211ENST00000522802 HEATR1Q9H583 2144 aaKnown RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 IGHV3-15A0A0B4J1V0 119 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 AQP7P3A6NL99 342 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms