RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GPR85P60893 370 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 PRKCDQ05655 676 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 COX10Q12887 443 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 TSPAN31Q12999 210 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 SELENBP1Q13228 472 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 HYAL4Q2M3T9 481 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 TMEM44Q2T9K0 475 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 GALNTL5Q7Z4T8 443 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 ZER1Q7Z7L7 766 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 NRMQ8IXM6 262 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 GTPBP8Q8N3Z3 284 aaPredicted RBP11.83□□□□□ -0.52
CPNE3-205ENST00000522240 ZADH2Q8N4Q0 377 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 ZNF511Q8NB15 262 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 GNPDA2Q8TDQ7 276 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 STK35Q8TDR2 534 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 JSRP1Q96MG2 331 aaPredicted RBP11.83□□□□□ -0.52
CPNE3-205ENST00000522240 NIPSNAP1Q9BPW8 284 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 HES7Q9BYE0 225 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 OR2B2Q9GZK3 357 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 ZNF703Q9H7S9 590 aaPredicted RBP11.83□□□□□ -0.52
CPNE3-205ENST00000522240 PAPOLBQ9NRJ5 636 aaKnown RBP11.83□□□□□ -0.52
CPNE3-205ENST00000522240 QPCTLQ9NXS2 382 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 VDAC3Q9Y277 283 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 TMED7Q9Y3B3 224 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 SPIN1Q9Y657 262 aaPredicted RBP11.83□□□□□ -0.52
CPNE3-205ENST00000522240 PTPRQQ9UMZ3 2332 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 EML6Q6ZMW3 1958 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 PINLYPA6NC86 204 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 EIF4E1BA6NMX2 242 aaKnown RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 ENO4A6NNW6 628 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 ZNF208O43345 1280 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 SUSD5O60279 629 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 NPIPB7O75200 414 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 GASTP01350 101 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 HK1P19367 917 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 MEOX1P50221 254 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 KCNAB2Q13303 367 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 TBR1Q16650 682 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 C3orf33Q6P1S2 294 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 TMPRSS11FQ6ZWK6 438 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 ADGRG3Q86Y34 549 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 CDK20Q8IZL9 346 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 ZFP62Q8NB50 900 aaPredicted RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 FAM98AQ8NCA5 519 aaKnown RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 OR6S1Q8NH40 331 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 PFN4Q8NHR9 129 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 POC1BQ8TC44 478 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 SLC25A43Q8WUT9 341 aaPredicted RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 FAM46AQ96IP4 442 aaKnown RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 GNRHR2Q96P88 292 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 UCK2Q9BZX2 261 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 MEPEQ9NQ76 525 aaPredicted RBP11.82□□□□□ -0.52
CPNE3-205ENST00000522240 KLHL1Q9NR64 748 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 SERINC1Q9NRX5 453 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 RAB26Q9ULW5 256 aa11.82□□□□□ -0.52
CPNE3-205ENST00000522240 TMEM72A0PK05 275 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 A8MVM7 634 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 ACOT7O00154 380 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 FZD7O75084 574 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 GLSO94925 669 aaPredicted RBP11.81□□□□□ -0.52
CPNE3-205ENST00000522240 IFI30P13284 250 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
CPNE3-205ENST00000522240 CRYZQ08257 329 aaKnown RBP11.81□□□□□ -0.52
CPNE3-205ENST00000522240 FOXD4Q12950 439 aaPredicted RBP11.81□□□□□ -0.52
CPNE3-205ENST00000522240 WLSQ5T9L3 541 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 ANKRD34AQ69YU3 496 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 KLHL17Q6TDP4 642 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 RASSF6Q6ZTQ3 369 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 PRICKLE2Q7Z3G6 844 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 CLDN22Q8N7P3 220 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 GTPBP3Q969Y2 492 aaKnown RBP11.81□□□□□ -0.52
CPNE3-205ENST00000522240 BPIFA2Q96DR5 249 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 SGTBQ96EQ0 304 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 MBOAT4Q96T53 435 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 ADI1Q9BV57 179 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 TTTY12Q9BZ98 90 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 TOR3AQ9H497 397 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 ZNF462Q96JM2 2506 aa11.81□□□□□ -0.52
CPNE3-205ENST00000522240 TNRC6AQ8NDV7 1962 aaKnown RBP11.8□□□□□ -0.52
CPNE3-205ENST00000522240 TRAV36DV7A0A075B6V5 113 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 H0YAE9 185 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 KPNA4O00629 521 aaPredicted RBP11.8□□□□□ -0.52
CPNE3-205ENST00000522240 ZIC3O60481 467 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 SNAP29O95721 258 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 HPNP05981 417 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 OSMP13725 252 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 PTNP21246 168 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 GDF1P27539 372 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 GPR4P46093 362 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 SLC9A3P48764 834 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 CLK1P49759 484 aaKnown RBP11.8□□□□□ -0.52
CPNE3-205ENST00000522240 ESRRGP62508 458 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 CXADRP78310 365 aa11.8□□□□□ -0.52
CPNE3-205ENST00000522240 PLGLB1Q02325 96 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms