RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ASCL3Q9NQ33 180 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GIMAP4Q9NUV9 329 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ADPRHL2Q9NX46 363 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PSD3Q9NYI0 1048 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 MRPL15Q9P015 296 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF225Q9UK10 706 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ANGPTL2Q9UKU9 493 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SNX6Q9UNH7 406 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 KCNK7Q9Y2U2 307 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 RNF11Q9Y3C5 154 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PTRH2Q9Y3E5 179 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM184BQ9Y519 407 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SLC22A7Q9Y694 548 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 VCANP13611 3396 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 COL5A1P20908 1838 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 LOC100509620A0A075B734 347 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1B0GX78 115 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1W2PP11 408 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SYNDIG1LA6NDD5 238 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 URADA6NGE7 173 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SLC28A1O00337 649 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 KLF11O14901 512 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 AZIN1O14977 448 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 P2RX6O15547 441 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CIDEAO60543 219 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RAD1O60671 282 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MITFO75030 526 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SNNO75324 88 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CRCPO75575 148 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SCRG1O75711 98 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 STK17BO94768 372 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 KIAA0754O94854 1291 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 OR4F21O95013 312 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SEMA3DO95025 777 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 HSPA4LO95757 839 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TBX6O95947 436 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 IGLV1-44P01699 117 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 STATHP02808 62 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SERPIND1P05546 499 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TFAP2AP05549 437 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 KLK3P07288 261 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CAPN1P07384 714 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CHRNGP07510 517 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SLC35G6P0C7Q6 338 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 PATE4P0C8F1 98 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SMIM10L1P0DMW3 83 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 UROSP10746 265 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 VPREB1P12018 145 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 NR1D1P20393 614 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 HMOX2P30519 316 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RORAP35398 523 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CCR10P46092 362 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SLC1A6P48664 564 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ARFIP1P53367 373 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ABCE1P61221 599 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 STXBP1P61764 594 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SKP1P63208 163 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 DCDP81605 110 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RUNX1T1Q06455 604 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF33BQ06732 778 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TGM3Q08188 693 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 BST1Q10588 318 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 IFT88Q13099 833 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CUL3Q13618 768 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RCN2Q14257 317 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 HERC3Q15034 1050 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 HKDC1Q2TB90 917 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ADPRMQ3LIE5 342 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 UGT3A2Q3SY77 523 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 NKAIN1Q4KMZ8 207 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TOR1AIP1Q5JTV8 583 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 KHDRBS2Q5VWX1 349 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CES4AQ5XG92 561 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TTC19Q6DKK2 380 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ADNP2Q6IQ32 1131 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RHBDD2Q6NTF9 364 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 NIPAL1Q6NVV3 410 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 PRMT9Q6P2P2 845 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RBMS3Q6XE24 437 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RNF165Q6ZSG1 346 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ZCCHC23Q6ZST2 131 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RPS27LQ71UM5 84 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ABHD13Q7L211 337 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TIPARPQ7Z3E1 657 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ZFAND4Q86XD8 727 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 KIRREL3Q8IZU9 778 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CLYBLQ8N0X4 340 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ARFGAP2Q8N6H7 521 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 GBP7Q8N8V2 638 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SLC38A9Q8NBW4 561 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 OR2L5Q8NG80 312 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 RAB3IL1Q8TBN0 382 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 WDR20Q8TBZ3 569 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MGARPQ8TDB4 240 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 AGAP11Q8TF27 550 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CKAP2Q8WWK9 683 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SELENOMQ8WWX9 145 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM190Q8WZ59 177 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF75CPQ92670 426 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms