RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 RBMY1CP0DJD4 496 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 CCDC130P13994 396 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 NCK1P16333 377 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ANXA13P27216 316 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 CALRP27797 417 aaKnown RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 RBMXP38159 391 aaKnown RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 CASP4P49662 377 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ZNF133P52736 654 aaPredicted RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 ACTR1AP61163 376 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 IL24Q13007 206 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 CHIT1Q13231 466 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 HERPUD1Q15011 391 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ARL6IP1Q15041 203 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 EXOC3L2Q2M3D2 409 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 LRRC23Q53EV4 343 aaPredicted RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 XKR4Q5GH76 650 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ZSCAN25Q6NSZ9 544 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 PMF1Q6P1K2 205 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 CASC1Q6TDU7 716 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 IGFL2Q6UWQ7 119 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 FAM43BQ6ZT52 329 aaPredicted RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 VRK2Q86Y07 508 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ERI1Q8IV48 349 aaKnown RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 CCDC50Q8IVM0 306 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 SLC35F2Q8IXU6 374 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 OR2L13Q8N349 312 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 RNF175Q8N4F7 328 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 OR2AP1Q8NGE2 309 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 OR52I1Q8NGK6 324 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 MAIP1Q8WWC4 291 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ST8SIA1Q92185 356 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 EFHD2Q96C19 240 aaPredicted RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 PSKH2Q96QS6 385 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 CCNL2Q96S94 520 aaPredicted RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 NPAS2Q99743 824 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 EBF4Q9BQW3 602 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 MAGT1Q9H0U3 335 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 VCPKMTQ9H867 229 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ZDHHC11Q9H8X9 412 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 C6orf203Q9P0P8 240 aaPredicted RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 PRPF19Q9UMS4 504 aaKnown RBP1.73□□□□□ -2.13
PCM1-214ENST00000521338 IFT52Q9Y366 437 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 UGT2A1Q9Y4X1 527 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 ATP10AO60312 1499 aa1.73□□□□□ -2.13
PCM1-214ENST00000521338 IGKV1D-8A0A087WSZ0 117 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 TRAV26-1A0A087WT03 109 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 IGKV6-21A0A0C4DH24 114 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 A0A0J9YXY3 114 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CLRN2A0PK11 232 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 IDSB3KWA1 339 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 TRIM49D1C9J1S8 452 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 F5H6K3 240 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 DCTN6O00399 190 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 RGS16O15492 202 aaPredicted RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 ZNF208O43345 1280 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 EMC8O43402 210 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 MMP23AO75900 390 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 ATP5LO75964 103 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 AP2A1O95782 977 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 LGI1O95970 557 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 IL1BP01584 269 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 COX5AP20674 150 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 ATP6V1B2P21281 511 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 GABRR1P24046 479 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 HMGB2P26583 209 aaKnown RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 HTR1FP30939 366 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CALCRP30988 508 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 RPL13AP40429 203 aaKnown RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 PTGDSP41222 190 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 MAP3K8P41279 467 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 GRIA1P42261 906 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CAV2P51636 162 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 EFNB2P52799 333 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 AIF1P55008 147 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CSNK1G2P78368 415 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 KLRC3Q07444 240 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 FGL1Q08830 312 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 GRB7Q14451 532 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 PDK3Q15120 406 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 SLC15A2Q16348 729 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 DPYSL2Q16555 572 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 NSUN5P1Q3KNT7 163 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CCDC14Q49A88 953 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 SFT2D3Q587I9 215 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 KLF17Q5JT82 389 aaPredicted RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 EOGTQ5NDL2 527 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 GPRC6AQ5T6X5 926 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 OTPQ5XKR4 325 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 OR4F3Q6IEY1 312 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CENPPQ6IPU0 288 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 ZNF530Q6P9A1 599 aaPredicted RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 TIFABQ6ZNK6 161 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 Q6ZPB1 254 aaPredicted RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 NLRP9Q7RTR0 991 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 CCDC65Q8IXS2 484 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 ZNF679Q8IYX0 411 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 ZCCHC7Q8N3Z6 543 aaKnown RBP1.72□□□□□ -2.13
PCM1-214ENST00000521338 MFSD9Q8NBP5 474 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 FBXO30Q8TB52 745 aa1.72□□□□□ -2.13
PCM1-214ENST00000521338 C7orf33Q8WU49 177 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms