RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LRIF1Q5T3J3 769 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 RNF220Q5VTB9 566 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 PRAMEF8Q5VWM4 474 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 PRAMEF7Q5VXH5 474 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 ZNF836Q6ZNA1 936 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 WFDC8Q8IUA0 241 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 CKAP2Q8WWK9 683 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 HSD17B8Q92506 261 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 KISS1RQ969F8 398 aaPredicted RBP15.11■□□□□ 0.01
SQLE-205ENST00000521232 DDIT4LQ96D03 193 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 SPDL1Q96EA4 605 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 TMEM204Q9BSN7 226 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 RAD21L1Q9H4I0 556 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 UBTD1Q9HAC8 227 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 BCL2L10Q9HD36 194 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 SLC25A37Q9NYZ2 338 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 CCDC167Q9P0B6 97 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 PRSS50Q9UI38 385 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 ZNF443Q9Y2A4 671 aaPredicted RBP15.11■□□□□ 0.01
SQLE-205ENST00000521232 CHST2Q9Y4C5 530 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 GMEB1Q9Y692 573 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 CADP27708 2225 aa15.11■□□□□ 0.01
SQLE-205ENST00000521232 NUDT7P0C024 238 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 GKN3PP0CG01 181 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 IL32P24001 234 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 EDNRAP25101 427 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 SLC16A1P53985 500 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
SQLE-205ENST00000521232 LARS2Q15031 903 aaKnown RBP15.1■□□□□ 0.01
SQLE-205ENST00000521232 RPS26P11Q5JNZ5 115 aaPredicted RBP15.1■□□□□ 0.01
SQLE-205ENST00000521232 C20orf204Q6ZNR8 217 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 MSRB3Q8IXL7 192 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 CLIP4Q8N3C7 705 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 PIGXQ8TBF5 258 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 STON2Q8WXE9 905 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 PLPPR2Q96GM1 343 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 MAGEB18Q96M61 343 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 SPATA9Q9BWV2 254 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 POTEKPQ9BYX7 375 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 A4GALTQ9NPC4 353 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 EMC3Q9P0I2 261 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 SLAMF8Q9P0V8 285 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 IFT52Q9Y366 437 aa15.1■□□□□ 0.01
SQLE-205ENST00000521232 GPR171O14626 319 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 EIF1BO60739 113 aaKnown RBP15.09■□□□□ 0.01
SQLE-205ENST00000521232 IMPDH2P12268 514 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 NTF4P34130 210 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 OR2B6P58173 313 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 SLC35A1P78382 337 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 TAB1Q15750 504 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 PAGE3Q5JUK9 113 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 WBP2NLQ6ICG8 309 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 BHLHA15Q7RTS1 189 aaPredicted RBP15.09■□□□□ 0.01
SQLE-205ENST00000521232 KRTAP1-3Q8IUG1 177 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 CCDC103Q8IW40 242 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 ZNF100Q8IYN0 542 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 LRRC75A-AS1Q8N1F1 130 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 MAL2Q969L2 176 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 DNAJA3Q96EY1 480 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 ARMC7Q9H6L4 198 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 DLL4Q9NR61 685 aa15.09■□□□□ 0.01
SQLE-205ENST00000521232 ZC3H12DA2A288 527 aaKnown RBP15.08■□□□□ 0
SQLE-205ENST00000521232 RAMP1O60894 148 aa15.08■□□□□ 0
SQLE-205ENST00000521232 PGM3O95394 542 aa15.08■□□□□ 0
SQLE-205ENST00000521232 PLAUP00749 431 aa15.08■□□□□ 0
SQLE-205ENST00000521232 FOSL1P15407 271 aa15.08■□□□□ 0
SQLE-205ENST00000521232 CXCR1P25024 350 aa15.08■□□□□ 0
SQLE-205ENST00000521232 RIPPLY3P57055 190 aa15.08■□□□□ 0
SQLE-205ENST00000521232 COPZ1P61923 177 aa15.08■□□□□ 0
SQLE-205ENST00000521232 NKX6-1P78426 367 aaPredicted RBP15.08■□□□□ 0
SQLE-205ENST00000521232 AGKQ53H12 422 aa15.08■□□□□ 0
SQLE-205ENST00000521232 ZNF311Q5JNZ3 666 aa15.08■□□□□ 0
SQLE-205ENST00000521232 SHEQ5VZ18 495 aa15.08■□□□□ 0
SQLE-205ENST00000521232 FBXW9Q5XUX1 488 aa15.08■□□□□ 0
SQLE-205ENST00000521232 ZNF704Q6ZNC4 412 aaPredicted RBP15.08■□□□□ 0
SQLE-205ENST00000521232 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.08■□□□□ 0
SQLE-205ENST00000521232 WFDC11Q8NEX6 87 aa15.08■□□□□ 0
SQLE-205ENST00000521232 BBS10Q8TAM1 723 aa15.08■□□□□ 0
SQLE-205ENST00000521232 IGFBPL1Q8WX77 278 aa15.08■□□□□ 0
SQLE-205ENST00000521232 SLC35B4Q969S0 331 aa15.08■□□□□ 0
SQLE-205ENST00000521232 CCL19Q99731 98 aa15.08■□□□□ 0
SQLE-205ENST00000521232 NAA11Q9BSU3 229 aaPredicted RBP15.08■□□□□ 0
SQLE-205ENST00000521232 NGBQ9NPG2 151 aa15.08■□□□□ 0
SQLE-205ENST00000521232 VAPAQ9P0L0 249 aa15.08■□□□□ 0
SQLE-205ENST00000521232 NOSIPQ9Y314 301 aaKnown RBP15.08■□□□□ 0
SQLE-205ENST00000521232 TRBV5-3A0A0A0MS03 114 aa15.07■□□□□ 0
SQLE-205ENST00000521232 A0A1W2PP18 115 aa15.07■□□□□ 0
SQLE-205ENST00000521232 NR5A2O00482 541 aa15.07■□□□□ 0
SQLE-205ENST00000521232 SMPD2O60906 423 aa15.07■□□□□ 0
SQLE-205ENST00000521232 LYZL6O75951 148 aa15.07■□□□□ 0
SQLE-205ENST00000521232 PRG2P13727 222 aa15.07■□□□□ 0
SQLE-205ENST00000521232 COX5AP20674 150 aa15.07■□□□□ 0
SQLE-205ENST00000521232 IGHV1-2P23083 117 aa15.07■□□□□ 0
SQLE-205ENST00000521232 PPIBP23284 216 aaKnown RBP15.07■□□□□ 0
SQLE-205ENST00000521232 SQLEQ14534 574 aa15.07■□□□□ 0
SQLE-205ENST00000521232 NCMAPQ5T1S8 102 aa15.07■□□□□ 0
SQLE-205ENST00000521232 PAQR6Q6TCH4 344 aa15.07■□□□□ 0
SQLE-205ENST00000521232 APH1AQ96BI3 265 aa15.07■□□□□ 0
SQLE-205ENST00000521232 RABEP2Q9H5N1 569 aa15.07■□□□□ 0
SQLE-205ENST00000521232 CACYBPQ9HB71 228 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms