RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ACTG2P63267 376 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 UBE2IP63279 158 aaKnown RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 TBC1D25Q3MII6 688 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 FAM69BQ5VUD6 431 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 GARNL3Q5VVW2 1013 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 DGAT2L6Q6ZPD8 337 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 KRT77Q7Z794 578 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 TOMM5Q8N4H5 51 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SIRT6Q8N6T7 355 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 ANKRD9Q96BM1 317 aaPredicted RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 GIMAP5Q96F15 307 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SLC25A18Q9H1K4 315 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 ABCG5Q9H222 651 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 ING3Q9NXR8 418 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 ACAD8Q9UKU7 415 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 RARRES3Q9UL19 164 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 A3GALT2U3KPV4 340 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 HRO43593 1189 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SBK2P0C263 348 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 CCDC92Q53HC0 331 aaPredicted RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 BICRALQ6AI39 1079 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 NIPAL3Q6P499 406 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 MARCH3Q86UD3 253 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SHISA5Q8N114 240 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 GDPD1Q8N9F7 314 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 DUSP19Q8WTR2 217 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SLC25A46Q96AG3 418 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 LCORQ96JN0 433 aaPredicted RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 TMEM185BQ9H7F4 350 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SEC61A2Q9H9S3 476 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 CMC2Q9NRP2 79 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 C2orf42Q9NWW7 574 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 AKAP7Q9P0M2 348 aaPredicted RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 KLHL21Q9UJP4 597 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SLCO1B1Q9Y6L6 691 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 OR6C70A6NIJ9 312 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 H3BML4 177 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 NKX2-2O95096 273 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 CHRNB1P11230 501 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 CRYBB2P43320 205 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 NR4A2P43354 598 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 FAM53BQ14153 422 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 TMEM201Q5SNT2 666 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 HES5Q5TA89 166 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 OTPQ5XKR4 325 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 CD300LDQ6UXZ3 194 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 DNAJC5GQ8N7S2 189 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 LSM14AQ8ND56 463 aaKnown RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 TRMT10AQ8TBZ6 339 aaKnown RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 TSSK2Q96PF2 358 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 ARHGAP9Q9BRR9 750 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 SARGQ9BW04 601 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 MRPL15Q9P015 296 aaKnown RBP9.35□□□□□ -0.91
MCF2-209ENST00000520602 MUTYHQ9UIF7 546 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 FKBP7Q9Y680 259 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
MCF2-209ENST00000520602 TRDV1A0A1B0GX56 115 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 INHBBP09529 407 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 RCVRNP35243 200 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 CTBP2P56545 445 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 PSG6Q00889 435 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 IFITM3Q01628 133 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 GPAT4Q86UL3 456 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 CLDN22Q8N7P3 220 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 OR2T4Q8NH00 348 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 NKD1Q969G9 470 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 RFT1Q96AA3 541 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 TM4SF19Q96DZ7 209 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
MCF2-209ENST00000520602 LPAR4Q99677 370 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 MED28Q9H204 178 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 FGF20Q9NP95 211 aaPredicted RBP9.34□□□□□ -0.91
MCF2-209ENST00000520602 POLE3Q9NRF9 147 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 SIT1Q9Y3P8 196 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 AHCTF1Q8WYP5 2266 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 NPIPA5E9PKD4 350 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 LMO7DNF2Z398 122 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 RECKO95980 971 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 PAHP00439 452 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 GIMD1P0DJR0 217 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 GNALP38405 381 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 CD97P48960 835 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 SNRPNP63162 240 aaKnown RBP9.34□□□□□ -0.91
MCF2-209ENST00000520602 EEF1A1P68104 462 aaKnown RBP9.34□□□□□ -0.91
MCF2-209ENST00000520602 PSPHP78330 225 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 CD300CQ08708 224 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 TPBGQ13641 420 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 GDPD3Q7L5L3 318 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 OR52N1Q8NH53 320 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 ASB15Q8WXK1 588 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 MSANTD3Q96H12 275 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 LMF1Q96S06 567 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 PDCD1LG2Q9BQ51 273 aa9.34□□□□□ -0.91
MCF2-209ENST00000520602 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms