RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	C4A	P0C0L4	1744 aa		3.22	□□□□□ -1.89
CTNNA1-222	ENST00000520400	C4B	P0C0L5	1744 aa		3.22	□□□□□ -1.89
CTNNA1-222	ENST00000520400	PCDH11X	Q9BZA7	1347 aa		3.21	□□□□□ -1.89
CTNNA1-222	ENST00000520400	FLNB	O75369	2602 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	EPOP	A6NHQ4	379 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PP2D1	A8MPX8	630 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PPIAL4D	F5H284	164 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OR7A17	O14581	309 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	HSPB1	P04792	205 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	H2AFZ	P0C0S5	128 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	IGLL1	P15814	213 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	DES	P17661	470 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ZBTB25	P24278	435 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KIF5B	P33176	963 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	HPCAL1	P37235	193 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OR3A4P	P47883	348 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RPL29	P47914	159 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PLA2G16	P53816	162 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RIPK4	P57078	832 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RPL32	P62910	135 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	EGFEM1P	Q0D2K5	195 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SLC39A6	Q13433	755 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ISX	Q2M1V0	245 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	NADK2	Q4G0N4	442 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OR2B11	Q5JQS5	317 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SCYL2	Q6P3W7	929 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TRPM8	Q7Z2W7	1104 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	APOBEC3F	Q8IUX4	373 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	CATSPER1	Q8NEC5	780 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PAQR8	Q8TEZ7	354 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SDSL	Q96GA7	329 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	C12orf66	Q96MD2	445 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	MCHR1	Q99705	422 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SLC30A2	Q9BRI3	323 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	CHIA	Q9BZP6	476 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TMEM117	Q9H0C3	514 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400		Q9H3A6	140 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ELOVL3	Q9HB03	270 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OR1A1	Q9P1Q5	309 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	GNG12	Q9UBI6	72 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PDE10A	Q9Y233	779 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SPACA6	W5XKT8	324 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ARHGAP21	Q5T5U3	1957 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ANKRD11	Q6UB99	2663 aa	Predicted RBP	3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SPEF2	Q9C093	1822 aa		3.21	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KDM6A	O15550	1401 aa	Predicted RBP	3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	QSER1	Q2KHR3	1735 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KMT2B	Q9UMN6	2715 aa	Predicted RBP	3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	VSTM2B	A6NLU5	285 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400		E7ENQ6	273 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ANP32D	O95626	131 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ZP3	P21754	424 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	VDAC1	P21796	283 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SOX6	P35712	828 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RGS4	P49798	205 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RIPPLY3	P57055	190 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RPS8	P62241	208 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RPS14	P62263	151 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	BDH1	Q02338	343 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RAB40B	Q12829	278 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SELPLG	Q14242	412 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	NDUFA9	Q16795	377 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	HSP90AA5P	Q58FG0	334 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SMIM5	Q71RC9	77 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SLC38A6	Q8IZM9	456 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TEX9	Q8N6V9	391 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ZNF540	Q8NDQ6	660 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	RAET1E	Q8TD07	263 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OR5B2	Q96R09	309 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ERP44	Q9BS26	406 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TPPP3	Q9BW30	176 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TEX13B	Q9BXU2	312 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	DUSP16	Q9BY84	665 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PPDPF	Q9H3Y8	114 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	B3GNT2	Q9NY97	397 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ONECUT1	Q9UBC0	465 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ZNF221	Q9UK13	617 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OARD1	Q9Y530	152 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	FLVCR1	Q9Y5Y0	555 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ZDBF2	Q9HCK1	2354 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KDR	P35968	1356 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ANKRD36C	Q5JPF3	1778 aa		3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	N4BP2	Q86UW6	1770 aa	Predicted RBP	3.2	□□□□□ -1.9
CTNNA1-222	ENST00000520400	MYH3	P11055	1940 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TUBAL3	A6NHL2	446 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KRTAP9-6	A8MVA2	160 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400		G3V4G9	280 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	CABYR	O75952	493 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KRT8	P05787	483 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	OR8U8	P0C7N1	319 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PGC	P20142	388 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	CYP2B6	P20813	491 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ATP6V1C1	P21283	382 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	HNRNPA2B1	P22626	353 aa	Known RBP	3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	CD80	P33681	288 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	DIO3	P55073	304 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ATF7IP2	Q5U623	682 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	FRA10AC1	Q70Z53	315 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	LRRC70	Q7Z2Q7	622 aa		3.19	□□□□□ -1.9
CTNNA1-222	ENST00000520400	TTC5	Q8N0Z6	440 aa		3.19	□□□□□ -1.9

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