RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PRIM2P49643 509 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 PCBP3P57721 371 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 SARNPP82979 210 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 PRR5P85299 388 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 EMX1Q04741 257 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 SLC18A2Q05940 514 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ZNF763Q0D2J5 394 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 C17orf67Q0P5P2 114 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 DAG1Q14118 895 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 TECRLQ5HYJ1 363 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 DHRS7BQ6IAN0 325 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 OR52E8Q6IFG1 317 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 IKBIPQ70UQ0 350 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 LINGO2Q7L985 606 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 LDLRAD3Q86YD5 345 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 SRFBP1Q8NEF9 429 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 FBXO27Q8NI29 283 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 TBC1D15Q8TC07 691 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 BCL2L2Q92843 193 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 SH3YL1Q96HL8 342 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ZNF681Q96N22 645 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 CHID1Q9BWS9 393 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 CENPHQ9H3R5 247 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ZNF385DQ9H6B1 395 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 PPANQ9NQ55 473 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 TIGARQ9NQ88 270 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 SDHAF3Q9NRP4 125 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 CLDN25C9JDP6 229 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 H0YHG0 523 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 UTS2O95399 124 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 LGI1O95970 557 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 CLPTM1O96005 669 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 VSIG10L2P0DP72 767 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 NR4A1P22736 598 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 MPGP29372 298 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 FOXA1P55317 472 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 LARS2Q15031 903 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 ODF2Q5BJF6 829 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 GDPGP1Q6ZNW5 385 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 NDUFA11Q86Y39 141 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 CCDC103Q8IW40 242 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 PALM2Q8IXS6 379 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 LAS2Q8IYD9 372 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 OR4C3Q8NH37 302 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 ST7LQ8TDW4 575 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 RGMAQ96B86 450 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 C16orf58Q96GQ5 468 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 PRR25Q96S07 402 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 PITHD1Q9GZP4 211 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 DDX31Q9H8H2 851 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 CHST2Q9Y4C5 530 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 MAD1L1Q9Y6D9 718 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 USH1CQ9Y6N9 552 aa5.58□□□□□ -1.52
CTNNA1-216ENST00000519489 CENPVL1A0A0U1RR11 272 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 CENPVL3A0A0U1RRI6 287 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 ISPDA4D126 451 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 AGAP5A6NIR3 686 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 C17orf100A8MU93 164 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 PSTPIP1O43586 416 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 UBOX5O94941 541 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 GAS8O95995 478 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 IGHV2-70P01814 119 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF14P17017 642 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 CHATP28329 748 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 HPDP32754 393 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 KRT20P35900 424 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 GP5P40197 560 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 E2F2Q14209 437 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 RAB39AQ14964 217 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 PDK3Q15120 406 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 CD226Q15762 336 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 C3orf36Q3SXR2 165 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 REP15Q6BDI9 236 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF774Q6NX45 483 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 FRRS1Q6ZNA5 592 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 SATL1Q86VE3 508 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 OR7G3Q8NG95 312 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 OR7G2Q8NG99 324 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 OR1K1Q8NGR3 316 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 ACTRT2Q8TDY3 377 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 CTNNBL1Q8WYA6 563 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 TFAP2CQ92754 450 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 RAB1CQ92928 201 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 DNAJA3Q96EY1 480 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 CNRIP1Q96F85 164 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 RBBP8Q99708 897 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 MEGF9Q9H1U4 602 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 SEMA6AQ9H2E6 1030 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 PATZ1Q9HBE1 687 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 SLAMF8Q9P0V8 285 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 ADAM30Q9UKF2 790 aa5.57□□□□□ -1.52
CTNNA1-216ENST00000519489 ARPC4-TTLL3A0A0A6YYG9 625 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 IGHV2-70DA0A0C4DH43 119 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 A0A1W2PRX2 142 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 TCRBV7S2A1N4TA0A589 114 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 GXYLT2A0PJZ3 443 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 NPEPPSL1A6NEC2 478 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 ERI2A8K979 691 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 POC1B-GALNT4F8VUJ3 575 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms