RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 DAPL1A0PJW8 107 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 A6NLC8 198 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 IFITM10A6NMD0 228 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 MCIDASD6RGH6 385 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 TCAPO15273 167 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 MT-ND5P03915 603 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CD2P06729 351 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 SLC25A4P12235 298 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CTNNB1P35222 781 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 RAB5CP51148 216 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 POU4F2Q12837 409 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 PGGHGQ32M88 737 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 AKIRIN2Q53H80 203 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 DMKNQ6E0U4 476 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-208ENST00000519004 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 ADCK2Q7Z695 626 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 BEST3Q8N1M1 668 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CFAP52Q8N1V2 620 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 OR6T1Q8NGN1 323 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 FAM46AQ96IP4 442 aaKnown RBP12.53□□□□□ -0.4
PABPC1-208ENST00000519004 ACBD6Q9BR61 282 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 DUSP15Q9H1R2 295 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CHRDQ9H2X0 955 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 SEC61A2Q9H9S3 476 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 MED17Q9NVC6 651 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 FOXJ3Q9UPW0 622 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 OR5H14A6NHG9 310 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 MEIS3P2A8K0S8 358 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 CLDN4O14493 209 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 KLHL18O94889 574 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 EPPINO95925 133 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 C8GP07360 202 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 AKR1C3P42330 323 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 RAB4BP61018 213 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 RPS13P62277 151 aaKnown RBP12.52□□□□□ -0.4
PABPC1-208ENST00000519004 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 MST1LQ2TV78 715 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 NBPF12Q5TAG4 269 aaPredicted RBP12.52□□□□□ -0.4
PABPC1-208ENST00000519004 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 DPPA4Q7L190 304 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 SSX6Q7RTT6 188 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 STOML3Q8TAV4 291 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 DUSP19Q8WTR2 217 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 ASB11Q8WXH4 323 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 GHSRQ92847 366 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 RAB3CQ96E17 227 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 PRRC1Q96M27 445 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 NDC1Q9BTX1 674 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 ZDHHC5Q9C0B5 715 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 ZCCHC2Q9C0B9 1178 aaKnown RBP12.52□□□□□ -0.4
PABPC1-208ENST00000519004 CHST6Q9GZX3 395 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.4
PABPC1-208ENST00000519004 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
PABPC1-208ENST00000519004 COL4A5P29400 1685 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 TBX18O95935 607 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 FGBP02675 491 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 NT5EP21589 574 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 ACKR3P25106 362 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 DPP4P27487 766 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 DLSTP36957 453 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 CASRP41180 1078 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 CDH4P55283 916 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 STPG1Q5TH74 334 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 SDHAF4Q5VUM1 108 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 C11orf87Q6NUJ2 197 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 SERPINA13PQ6UXR4 307 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 GAREM2Q75VX8 874 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 ABHD13Q7L211 337 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 ZNF614Q8N883 585 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 KLHDC9Q8NEP7 349 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 SDR9C7Q8NEX9 313 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 SKA2Q8WVK7 121 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-208ENST00000519004 MISP3Q96FF7 219 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 MFRPQ9BY79 579 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 SPATC1LQ9H0A9 340 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 IL26Q9NPH9 171 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 GDE1Q9NZC3 331 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 NLRC5Q86WI3 1866 aa12.52□□□□□ -0.41
PABPC1-208ENST00000519004 BTBD17A6NE02 478 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 ANKRD61A6NGH8 418 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-208ENST00000519004 ACOT7O00154 380 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 SULT2B1O00204 365 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 GABRR2P28476 465 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 PPP2CBP62714 309 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 RPS15P62841 145 aaKnown RBP12.51□□□□□ -0.41
PABPC1-208ENST00000519004 PPP2CAP67775 309 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 MRPS10P82664 201 aaKnown RBP12.51□□□□□ -0.41
PABPC1-208ENST00000519004 CLINT1Q14677 625 aa12.51□□□□□ -0.41
PABPC1-208ENST00000519004 KCNAB1Q14722 419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms