RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 CLIP4Q8N3C7 705 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 OR52P1PQ8NH57 321 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 SMR3AQ99954 134 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 EBF4Q9BQW3 602 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 RSPO3Q9BXY4 272 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-218ENST00000518689 RMND5AQ9H871 391 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 SLC52A3Q9NQ40 469 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 TMEM181Q9P2C4 612 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 P2RX2Q9UBL9 471 aa10.94□□□□□ -0.66
VEGFA-218ENST00000518689 DPRXA6NFQ7 191 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ARHGEF9O43307 516 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PGM3O95394 542 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 CNOT4O95628 575 aaKnown RBP10.93□□□□□ -0.66
VEGFA-218ENST00000518689 NUDT7P0C024 238 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 GKN3PP0CG01 181 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 BMP2P12643 396 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PRG2P13727 222 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PAX1P15863 534 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 CRISP3P54108 245 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 OR2B6P58173 313 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 GNA13Q14344 377 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 RGNQ15493 299 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 C6orf10Q5SRN2 563 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ADAM5Q6NVV9 412 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PRSS57Q6UWY2 283 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 P3H2Q8IVL5 708 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ZNF440Q8IYI8 595 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ZNF100Q8IYN0 542 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ZNF433Q8N7K0 673 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ZNF611Q8N823 705 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PIGXQ8TBF5 258 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 AKAP1Q92667 903 aaKnown RBP eCLIP10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ZHX1-C8orf76Q96EF9 292 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PERPQ96FX8 193 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 TMEM19Q96HH6 336 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 C18orf12Q96KH6 178 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
VEGFA-218ENST00000518689 POTEKPQ9BYX7 375 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 GSX2Q9BZM3 304 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 TCF7L2Q9NQB0 619 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 SLC25A37Q9NYZ2 338 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 CALML5Q9NZT1 146 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 EMC3Q9P0I2 261 aa10.93□□□□□ -0.66
VEGFA-218ENST00000518689 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-218ENST00000518689 NOSIPQ9Y314 301 aaKnown RBP10.93□□□□□ -0.66
VEGFA-218ENST00000518689 PLCE1Q9P212 2302 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 A0A096LPI6 279 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 A0A0G2JPF8 293 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 HNRNPCL2B2RXH8 293 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 HNRNPCL3B7ZW38 293 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 CLIC1O00299 241 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 HNRNPCL1O60812 293 aaKnown RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 IGHV3-9P01782 118 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 THBS1P07996 1170 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 HNRNPCL4P0DMR1 293 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 HOXB4P17483 251 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 PTH2RP49190 550 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 MAP2K6P52564 334 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 LIN52Q52LA3 116 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 LRIF1Q5T3J3 769 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 RNF220Q5VTB9 566 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 BIVMQ86UB2 503 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 MSRB3Q8IXL7 192 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 C10orf111Q8N326 155 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 CIARTQ8N365 385 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 LRRC8CQ8TDW0 803 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 NEUROG1Q92886 237 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 MAL2Q969L2 176 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 DDIT4LQ96D03 193 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 CCDC28BQ9BUN5 200 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 ESRP2Q9H6T0 727 aaKnown RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 ZNF701Q9NV72 531 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 THUMPD1Q9NXG2 353 aaKnown RBP10.92□□□□□ -0.66
VEGFA-218ENST00000518689 SLAMF8Q9P0V8 285 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 PRDM4Q9UKN5 801 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 RNF115Q9Y4L5 304 aa10.92□□□□□ -0.66
VEGFA-218ENST00000518689 GPR171O14626 319 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 POLR3GO15318 223 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-218ENST00000518689 CD3EP07766 207 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 INHBBP09529 407 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 UQCRBP14927 111 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 GGT1P19440 569 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 ADSLP30566 484 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-218ENST00000518689 SLC35A1P78382 337 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 BNIP2Q12982 314 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 CAPRIN1Q14444 709 aaKnown RBP10.91□□□□□ -0.66
VEGFA-218ENST00000518689 SLC17A1Q14916 467 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 LARS2Q15031 903 aaKnown RBP10.91□□□□□ -0.66
VEGFA-218ENST00000518689 PPA1Q15181 289 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 PAGE3Q5JUK9 113 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 TIMM23BQ5SRD1 257 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 PAQR6Q6TCH4 344 aa10.91□□□□□ -0.66
VEGFA-218ENST00000518689 YTHDF3Q7Z739 585 aaKnown RBP10.91□□□□□ -0.66
VEGFA-218ENST00000518689 SERPINA11Q86U17 422 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms