RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SRMP19623 302 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 PSMB5P28074 263 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 GRPRP30550 384 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 RAD52P43351 418 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 FGL2Q14314 439 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 ITPRIPL2Q3MIP1 535 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 DCST2Q5T1A1 773 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 PLPP4Q5VZY2 271 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 C18orf63Q68DL7 685 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 HEPHL1Q6MZM0 1159 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 OR4E2Q8NGC2 313 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 OR8D4Q8NGM9 314 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 OR2T4Q8NH00 348 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 NOX4Q9NPH5 578 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 USP36Q9P275 1121 aaKnown RBP6.19□□□□□ -1.42
CPNE3-203ENST00000517490 HCSTQ9UBK5 93 aa6.19□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF236Q9UL36 1845 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 LOC105371267A0A1B0GV96 52 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 HRO43593 1189 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SULT1A3P0DMM9 295 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SULT1A4P0DMN0 295 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CALCBP10092 127 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SYN1P17600 705 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ANXA7P20073 488 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ATP5A1P25705 553 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 MVDP53602 400 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TAS2R19P59542 299 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ERVFC1P60507 584 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PRPS1P60891 318 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 Q5BKY6 102 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 RNASE10Q5GAN6 216 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 LEG1Q6P5S2 330 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PSRC1Q6PGN9 363 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 VITQ6UXI7 678 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 Q6ZNB5 142 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 RAB11FIP2Q7L804 512 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TAF8Q7Z7C8 310 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ARL6IP6Q8N6S5 226 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ANKRD53Q8N9V6 530 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 OR11H7Q8NGC8 314 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ASB13Q8WXK3 278 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 GAL3ST3Q96A11 431 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TRIM43Q96BQ3 446 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 MCOLN1Q9GZU1 580 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CST11Q9H112 138 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 DHDHQ9UQ10 334 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ERVK-19Q9WJR5 959 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TBC1D3DA0A087WVF3 549 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TBC1D3IA0A087WXS9 549 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ACOD1A6NK06 481 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TBC1D3LB9A6J9 549 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TOR1AO14656 332 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TMPRSS11DO60235 418 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 LCMT2O60294 686 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CDC123O75794 336 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 IL5P05113 134 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TBC1D3HP0C7X1 549 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PF4V1P10720 104 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 EPXP11678 715 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CTRB1P17538 263 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CYCSP99999 105 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 FAM189A2Q15884 450 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SLC25A35Q3KQZ1 300 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 DEFB134Q4QY38 66 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 AADACL4Q5VUY2 407 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CTRB2Q6GPI1 263 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TBC1D3CQ6IPX1 549 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM150AQ86TG1 271 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TBC1D3Q8IZP1 549 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SYS1Q8N2H4 156 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SPICQ8N5J4 248 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SIRT6Q8N6T7 355 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF615Q8N8J6 731 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ZSCAN1Q8NBB4 408 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 STEAP2Q8NFT2 490 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 OR4Q3Q8NH05 313 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 HGDQ93099 445 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ALG14Q96F25 216 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 UBL7Q96S82 380 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PHB2Q99623 299 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 G6PC3Q9BUM1 346 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SLC38A1Q9H2H9 487 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SLC6A20Q9NP91 592 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 GPATCH2Q9NW75 528 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CLEC4EQ9ULY5 219 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SCML1Q9UN30 329 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 FLVCR2Q9UPI3 526 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 RALGAPA2Q2PPJ7 1873 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TRBV23OR9-2A0A075B6M9 112 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF705EA8MWA4 302 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 GRXCR1A8MXD5 290 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 AIPO00170 330 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 KCNJ13O60928 360 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PAPLNO95428 1278 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 TPT1P13693 172 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PDX1P52945 283 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ARF3P61204 181 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SIM1P81133 766 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ARF1P84077 181 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 OC90Q02509 493 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms