RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PRPF18Q99633 342 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NRTNQ99748 197 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TM9SF2Q99805 663 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PSD2Q9BQI7 771 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 BTBD2Q9BX70 525 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 REXO4Q9GZR2 422 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PRDM13Q9H4Q3 707 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NARFLQ9H6Q4 476 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NOL11Q9H8H0 719 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 DDX31Q9H8H2 851 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ANKHQ9HCJ1 492 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ZBTB26Q9HCK0 441 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 LYRM4Q9HD34 91 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 ACKR4Q9NPB9 350 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 VPS29Q9UBQ0 182 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 RSL24D1Q9UHA3 163 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FOXJ3Q9UPW0 622 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 CAMK2AQ9UQM7 478 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 RUVBL1Q9Y265 456 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPS33Q9Y291 106 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KLHL20Q9Y2M5 609 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MMACHCQ9Y4U1 282 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PMF1-BGLAPU3KQ54 211 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SPACA6W5XKT8 324 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SNRNP200O75643 2136 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF816-ZNF321PA0A0X1KG74 233 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 KRT87PA6NCN2 255 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TMEM247A6NEH6 219 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 MAGEB17A8MXT2 336 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TMEM114B3SHH9 223 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 H3BMQ9 156 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 AP4M1O00189 453 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 PSMD12O00232 456 aaPredicted RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CYR61O00622 381 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 FBP2O00757 339 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC22A2O15244 555 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CHST10O43529 356 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 AKAP10O43572 662 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 B3GALT2O43825 422 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CTNSO60931 367 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 RSL1D1O76021 490 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ZFAND5O76080 213 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 SUPT7LO94864 414 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 H6PDO95479 791 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TBX6O95947 436 aaPredicted RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CHEK2O96017 543 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 EIF2S1P05198 315 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 JUNP05412 331 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 FHP07954 510 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 IFI6P09912 130 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 GSTT2P0CG29 244 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 GSTT2BP0CG30 244 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 UROSP10746 265 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 BMP4P12644 408 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 RNH1P13489 461 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF12P17014 697 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 DDX5P17844 614 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CD22P20273 847 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 FBLP22087 321 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 HIST1H1TP22492 207 aaPredicted RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ATP5A1P25705 553 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CNTFRP26992 372 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TRPC1P48995 793 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 MMP15P51511 669 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 PSMD7P51665 324 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ABCE1P61221 599 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 RPL15P61313 204 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 PSPHP78330 225 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 BTN3A2P78410 334 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ADARB1P78563 741 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TRAF3Q13114 568 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TSTA3Q13630 321 aaPredicted RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 SERTAD2Q14140 314 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 RNPS1Q15287 305 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 CPSF6Q16630 551 aaKnown RBP eCLIP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 MRGPRG-AS1Q2M3A8 158 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 AP5B1Q2VPB7 878 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ZBED5Q49AG3 693 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 SPIN4Q56A73 249 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ARMCX4Q5H9R4 360 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 NHSL2Q5HYW2 709 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 C6orf10Q5SRN2 563 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 IL23RQ5VWK5 629 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 OR4C11Q6IEV9 310 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 MRM1Q6IN84 353 aaKnown RBP2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ANKRD26P1Q6NSI1 321 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TRIM40Q6P9F5 258 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 VWA1Q6PCB0 445 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TMEM65Q6PI78 240 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC2A7Q6PXP3 512 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF620Q6ZNG0 422 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 QSOX2Q6ZRP7 698 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 GPRIN3Q6ZVF9 776 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 IKBIPQ70UQ0 350 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 PRSS41Q7RTY9 318 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 VN1R5Q7Z5H4 357 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 UBE3DQ7Z6J8 389 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 TMPRSS11BQ86T26 416 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 SNX32Q86XE0 403 aa2.71□□□□□ -1.98
SCARNA13-201ENST00000516672 C10orf107Q8IVU9 208 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms