RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 HDGFL3Q9Y3E1 203 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 SAMHD1Q9Y3Z3 626 aaKnown RBP18.89■□□□□ 0.61
LSM6-207ENST00000515311 SVILO95425 2214 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 ZC3H12DA2A288 527 aaKnown RBP18.88■□□□□ 0.61
LSM6-207ENST00000515311 HTR3EA5X5Y0 456 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 H0YHG0 523 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 TNFRSF11BO00300 401 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 GNGT2O14610 69 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 BCKDKO14874 412 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 IGF2P01344 180 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 SHC1P29353 583 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 SFTPDP35247 375 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 STARP49675 285 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 CLDN20P56880 219 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 CTU2Q2VPK5 515 aaKnown RBP18.88■□□□□ 0.61
LSM6-207ENST00000515311 TMEM176BQ3YBM2 270 aaPredicted RBP18.88■□□□□ 0.61
LSM6-207ENST00000515311 C1orf140Q5VVS0 124 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 PODNL1Q6PEZ8 512 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 FGD2Q7Z6J4 655 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 PM20D2Q8IYS1 436 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 RNF113BQ8IZP6 322 aaKnown RBP18.88■□□□□ 0.61
LSM6-207ENST00000515311 MEIOBQ8N635 442 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 OR4C15Q8NGM1 316 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 OR52J3Q8NH60 311 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 SMPDL3BQ92485 455 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 ALPK1Q96QP1 1244 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 KLHL4Q9C0H6 718 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 VNN3Q9NY84 501 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 TMCC3Q9ULS5 477 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 MED31Q9Y3C7 131 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 CHD6Q8TD26 2715 aa18.88■□□□□ 0.61
LSM6-207ENST00000515311 TRAV36DV7A0A075B6V5 113 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 A0A087WUU8 490 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 SH3PXD2BA1X283 911 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 TFPIP10646 304 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 PTGS2P35354 604 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 UGT2B15P54855 530 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 GFRALQ6UXV0 394 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 ZNF730Q6ZMV8 503 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 MBOAT2Q6ZWT7 520 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 LINC00471Q8N535 108 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 OR6S1Q8NH40 331 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 LRTOMTQ8WZ04 291 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 WDYHV1Q96HA8 205 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 ADGRG7Q96K78 797 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 ARL5BQ96KC2 179 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 OR5B2Q96R09 309 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 BDH2Q9BUT1 245 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 TRAPPC4Q9Y296 219 aa18.87■□□□□ 0.61
LSM6-207ENST00000515311 FAM208BQ5VWN6 2430 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 A0A0J9YW62 118 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 SEC14L5O43304 696 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 AHSA1O95433 338 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 OPN1LWP04000 364 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 DNAJA1P31689 397 aaKnown RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 IDUAP35475 653 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 SUCLG1P53597 346 aaKnown RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 CLDN15P56746 228 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 FOXD4Q12950 439 aaPredicted RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 MYBPHQ13203 477 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 SEC23BQ15437 767 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 EXOC3L2Q2M3D2 409 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 PDSS1Q5T2R2 415 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 WLSQ5T9L3 541 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 P3H2Q8IVL5 708 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 UBQLNLQ8IYU4 475 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 ST6GALNAC3Q8NDV1 305 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 MIB2Q96AX9 1013 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 KTI12Q96EK9 354 aaPredicted RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 CENPNQ96H22 339 aaPredicted RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 NTN4Q9HB63 628 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 MEPEQ9NQ76 525 aaPredicted RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 PAQR5Q9NXK6 330 aaPredicted RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 TNFRSF10DQ9UBN6 386 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 RRP15Q9Y3B9 282 aaKnown RBP18.86■□□□□ 0.61
LSM6-207ENST00000515311 U3KQV3 271 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 KIAA1549Q9HCM3 1950 aa18.86■□□□□ 0.61
LSM6-207ENST00000515311 GTF3C1Q12789 2109 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 NPIPA2E9PIF3 369 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 NPIPA3F8WFD2 350 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 EIF1AYO14602 144 aaKnown RBP18.85■□□□□ 0.61
LSM6-207ENST00000515311 DNPH1O43598 174 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 OR2T1O43869 369 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 FZD7O75084 574 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 E2F6O75461 281 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 PMS2P2O95744 297 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 CTBP2P56545 445 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 RBPJQ06330 500 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 SOWAHCQ53LP3 525 aaPredicted RBP18.85■□□□□ 0.61
LSM6-207ENST00000515311 FAM69AQ5T7M9 428 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 HMBOX1Q6NT76 420 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 TMPPEQ6ZT21 453 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 RRM2BQ7LG56 351 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 NRMQ8IXM6 262 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 OR4K5Q8NGD3 323 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 MFSD8Q8NHS3 518 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 PKP2Q99959 881 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 PTDSS2Q9BVG9 487 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 COQ10BQ9H8M1 238 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms