RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CCNA2P20248 432 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 IGHV1-2P23083 117 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 TACR3P29371 465 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 KRTAP21-3Q3LHN1 58 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 RPS26P11Q5JNZ5 115 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 C6orf10Q5SRN2 563 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 FBXW9Q5XUX1 488 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ALKBH2Q6NS38 261 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 YTHDF3Q7Z739 585 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ATG4DQ86TL0 474 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 VRK2Q86Y07 508 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF100Q8IYN0 542 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF433Q8N7K0 673 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 OR52P1PQ8NH57 321 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC38A5Q8WUX1 472 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM171Q8WVE6 324 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 AKAP1Q92667 903 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 DNAJA3Q96EY1 480 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM19Q96HH6 336 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 COX4I2Q96KJ9 171 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ATP6V1G3Q96LB4 118 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ADAM19Q9H013 955 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ESRP2Q9H6T0 727 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 NGBQ9NPG2 151 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 TCF7L2Q9NQB0 619 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF701Q9NV72 531 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 RLIMQ9NVW2 624 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 MALT1Q9UDY8 824 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 PRDM4Q9UKN5 801 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 NOSIPQ9Y314 301 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 PCDHB14Q9Y5E9 798 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 A0A0G2JPF8 293 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 ZC3H12DA2A288 527 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 HNRNPCL2B2RXH8 293 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 HNRNPCL3B7ZW38 293 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 GPR171O14626 319 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 POLR3GO15318 223 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 HNRNPCL1O60812 293 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 PGM3O95394 542 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 CD3EP07766 207 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 GKN3PP0CG01 181 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 HNRNPCL4P0DMR1 293 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 BMP2P12643 396 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 GGT1P19440 569 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 NTF4P34130 210 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 ACAA2P42765 397 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 OR2B6P58173 313 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 STX1BP61266 288 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC35A1P78382 337 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 BSPH1Q075Z2 132 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 FADDQ13158 208 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 CAPRIN1Q14444 709 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 PPA1Q15181 289 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 RGNQ15493 299 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 STK11Q15831 433 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 ZSWIM7Q19AV6 140 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF672Q499Z4 452 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 TTMPQ5BVD1 217 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 TIMM23BQ5SRD1 257 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 LRIF1Q5T3J3 769 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 PRAMEF8Q5VWM4 474 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 PRAMEF7Q5VXH5 474 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC2A7Q6PXP3 512 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 PAQR6Q6TCH4 344 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SSX8Q7RTT4 187 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 CCDC103Q8IW40 242 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 MSRB3Q8IXL7 192 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 LRRC8CQ8TDW0 803 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 FBXW5Q969U6 566 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 APH1AQ96BI3 265 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 Q96MF0 132 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SMR3AQ99954 134 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 EBF4Q9BQW3 602 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 CCDC28BQ9BUN5 200 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SPATA9Q9BWV2 254 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 RAD21L1Q9H4I0 556 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 CXorf56Q9H5V9 222 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 A4GALTQ9NPC4 353 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SLCO1B3Q9NPD5 702 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 NPAP1Q9NZP6 1156 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC9A8Q9Y2E8 581 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 CHST2Q9Y4C5 530 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 FLVCR1Q9Y5Y0 555 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 MPDZO75970 2070 aa9.23□□□□□ -0.93
HMGXB3-205ENST00000514469 ABCA4P78363 2273 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 HEATR5AQ86XA9 2040 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 A0A096LPI6 279 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM247A6NEH6 219 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 DPRXA6NFQ7 191 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 OR5H1A6NKK0 313 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM229AB2RXF0 380 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 PDLIM1O00151 329 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 CLOCKO15516 846 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 IGHV3-9P01782 118 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 NUDT7P0C024 238 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 DANCRP0C864 163 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 ADSLP30566 484 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms