RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 CTPS2Q9NRF8 586 aa9.06□□□□□ -0.96
CLDND1-227ENST00000513452 ZCCHC3Q9NUD5 404 aaKnown RBP9.06□□□□□ -0.96
CLDND1-227ENST00000513452 CHRNA9Q9UGM1 479 aa9.06□□□□□ -0.96
CLDND1-227ENST00000513452 STK38LQ9Y2H1 464 aa9.06□□□□□ -0.96
CLDND1-227ENST00000513452 CORINQ9Y5Q5 1042 aa9.06□□□□□ -0.96
CLDND1-227ENST00000513452 SPIN1Q9Y657 262 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-227ENST00000513452 SERTM1A2A2V5 107 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 FAM187AA6NFU0 413 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 OR6C65A6NJZ3 312 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 NR5A2O00482 541 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 LGI1O95970 557 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 CELA3BP08861 270 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 UBTFL6P0CB48 400 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-227ENST00000513452 TAC1P20366 129 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 FRKP42685 505 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-227ENST00000513452 ASMTP46597 345 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 PKNOX1P55347 436 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 ELFN2Q5R3F8 820 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 MYPOPQ86VE0 399 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-227ENST00000513452 POMGNT2Q8NAT1 580 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 OR1K1Q8NGR3 316 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 CLHC1Q8NHS4 586 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 ZNF764Q96H86 408 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-227ENST00000513452 ANKRD27Q96NW4 1050 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 CCDC106Q9BWC9 280 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 TMPRSS13Q9BYE2 586 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 LAT2Q9GZY6 243 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 SIRT3Q9NTG7 399 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-227ENST00000513452 ACER3Q9NUN7 267 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 TMEM45AQ9NWC5 275 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 MED29Q9NX70 200 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 SH3BP4Q9P0V3 963 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 CRNNQ9UBG3 495 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-227ENST00000513452 HDGFL3Q9Y3E1 203 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 KCNE3Q9Y6H6 103 aa9.05□□□□□ -0.96
CLDND1-227ENST00000513452 A0A096LPE4 126 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 A0A0G2JMP0 313 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 A0A0X1KG70 313 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 A0A1W2PPZ6 126 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 VSTM5A8MXK1 200 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 PPIHO43447 177 aaKnown RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 RAD51CO43502 376 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 DNAJA2O60884 412 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 SEC22BO75396 215 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 KRT33AO76009 404 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 RSL1D1O76021 490 aaKnown RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 CSTAP01040 98 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 IGLV1-44P01699 117 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 INHBAP08476 426 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 NUDT17P0C025 328 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 CCNA2P20248 432 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ACHEP22303 614 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 APOBEC1P41238 236 aaKnown RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 PAFAH1B1P43034 410 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 LMO4P61968 165 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 TP53BP2Q13625 1128 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 SLC17A1Q14916 467 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ZNF311Q5JNZ3 666 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ABHD12BQ7Z5M8 362 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 OR4M2Q8NGB6 313 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ZNF563Q8TA94 476 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ADAMTS15Q8TE58 950 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 AURKBQ96GD4 344 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 TSSK3Q96PN8 268 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ALKBH3Q96Q83 286 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 PKP2Q99959 881 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ACTRT3Q9BYD9 372 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 REEP4Q9H6H4 257 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ACSS3Q9H6R3 686 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 MID1IP1Q9NPA3 183 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 SLC52A3Q9NQ40 469 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ZNF275Q9NSD4 429 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ACSS1Q9NUB1 689 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-227ENST00000513452 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
CLDND1-227ENST00000513452 ARPC4-TTLL3A0A0A6YYG9 625 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 IGHV2OR16-5A0A0B4J2B6 119 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 CENPVL1A0A0U1RR11 272 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 NPIPB8E9PQR5 432 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 M0R233 179 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 ANKRD28O15084 1053 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 PRSS23O95084 383 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 MPZL1O95297 269 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 HPXP02790 462 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 TCN1P20061 433 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-227ENST00000513452 IMPDH1P20839 514 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 COL8A2P25067 703 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 H3F3AP84243 136 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 MYBPC1Q00872 1141 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 CAV1Q03135 178 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 ZP4Q12836 540 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 SNTB2Q13425 540 aaKnown RBP9.03□□□□□ -0.96
CLDND1-227ENST00000513452 C3orf36Q3SXR2 165 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 SLC9B1Q4ZJI4 515 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 KRT80Q6KB66 452 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 ZDHHC24Q6UX98 284 aa9.03□□□□□ -0.96
CLDND1-227ENST00000513452 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
CLDND1-227ENST00000513452 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms