RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 FRKP42685 505 aaPredicted RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 DIO1P49895 249 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 CHN2P52757 468 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 SNRPD2P62316 118 aaKnown RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 CSNK2A1P68400 391 aaPredicted RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 KIAA0040Q15053 153 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 CARTPTQ16568 116 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 GALNTL6Q49A17 601 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 XKR7Q5GH72 579 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 NOXRED1Q6NXP6 359 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 RNF165Q6ZSG1 346 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 C1orf162Q8NEQ5 155 aaPredicted RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 FBXO30Q8TB52 745 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 C7orf26Q96N11 449 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 OR5B2Q96R09 309 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 STACQ99469 402 aa12.16□□□□□ -0.46
SPCS3-204ENST00000513139 ACSS1Q9NUB1 689 aaPredicted RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 FBXO9Q9UK97 447 aaPredicted RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 NOSIPQ9Y314 301 aaKnown RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 POLR3HQ9Y535 204 aaPredicted RBP12.16□□□□□ -0.46
SPCS3-204ENST00000513139 ZNF716A6NP11 495 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 PDLIM1O00151 329 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 GTPBP1O00178 669 aaKnown RBP12.15□□□□□ -0.46
SPCS3-204ENST00000513139 LSM1O15116 133 aaKnown RBP12.15□□□□□ -0.46
SPCS3-204ENST00000513139 TBX19O60806 448 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 RSL1D1O76021 490 aaKnown RBP12.15□□□□□ -0.46
SPCS3-204ENST00000513139 H6PDO95479 791 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 ITGA5P08648 1049 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 ATP6V1C1P21283 382 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 RFTN2Q52LD8 501 aaPredicted RBP12.15□□□□□ -0.46
SPCS3-204ENST00000513139 CCNJQ5T5M9 372 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 TMPPEQ6ZT21 453 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 SZRD1Q7Z422 152 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 MAVSQ7Z434 540 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 WDR31Q8NA23 367 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 TOR1AIP2Q8NFQ8 470 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 OR5W2Q8NH69 310 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 CIDECQ96AQ7 238 aaPredicted RBP12.15□□□□□ -0.46
SPCS3-204ENST00000513139 ZNF524Q96C55 264 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 TUBGCP3Q96CW5 907 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 C16orf58Q96GQ5 468 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 C1QTNF6Q9BXI9 259 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 WDR55Q9H6Y2 383 aaPredicted RBP12.15□□□□□ -0.46
SPCS3-204ENST00000513139 AKTIPQ9H8T0 292 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 C1orf109Q9NX04 203 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
SPCS3-204ENST00000513139 TMEM89A2RUT3 159 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 LRP5LA4QPB2 252 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 POM121CA8CG34 1229 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SULT2B1O00204 365 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SDHDO14521 159 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 HDAC3O15379 428 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 EIF4E2O60573 245 aaKnown RBP12.14□□□□□ -0.47
SPCS3-204ENST00000513139 PRPH2P23942 346 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SERPINF1P36955 418 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SLC16A1P53985 500 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 ATP12AP54707 1039 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 CDH15P55291 814 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 ACTG1P63261 375 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 TGFBR3Q03167 851 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 CBFBQ13951 182 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 MLC1Q15049 377 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 QPRTQ15274 297 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 TIGD2Q4W5G0 525 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 C6orf136Q5SQH8 315 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SLC46A3Q7Z3Q1 461 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SLC25A43Q8WUT9 341 aaPredicted RBP12.14□□□□□ -0.47
SPCS3-204ENST00000513139 ST8SIA1Q92185 356 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 THOC1Q96FV9 657 aaKnown RBP12.14□□□□□ -0.47
SPCS3-204ENST00000513139 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
SPCS3-204ENST00000513139 PIGUQ9H490 435 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SLC17A5Q9NRA2 495 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 SERINC1Q9NRX5 453 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 FAM53CQ9NYF3 392 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 BAIAP2L1Q9UHR4 511 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 DTNAQ9Y4J8 743 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 USH1CQ9Y6N9 552 aa12.14□□□□□ -0.47
SPCS3-204ENST00000513139 NPIPA5A0A0B4J1W7 369 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 B9A039 149 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 FAM157AC9JC47 383 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 NPIPA7E9PJI5 369 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 NPIPB8E9PQR5 432 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 NPIPB9F8W1W9 429 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 POLR3GO15318 223 aaPredicted RBP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF264O43296 627 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 DNPH1O43598 174 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 DNAJA2O60884 412 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 LILRA1O75019 489 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 MRPL33O75394 65 aaKnown RBP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 PDE5AO76074 875 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 STAMBPO95630 424 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 NPIPA8P0DM63 369 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 APEX1P27695 318 aaKnown RBP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 EPHA3P29320 983 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms