RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FAM182AQ5T1J6 154 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 DCAF12Q5T6F0 453 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 PIP5KL1Q5T9C9 394 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 ARMC12Q5T9G4 340 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 NKAIN2Q5VXU1 208 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 PAQR6Q6TCH4 344 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 KDM7AQ6ZMT4 941 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 KIAA1328Q86T90 577 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TRIM69Q86WT6 500 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 CNTN4Q8IWV2 1026 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 LINC00518Q8N0U6 118 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 UMODL1-AS1Q8N2C9 162 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 PARP8Q8N3A8 854 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 ATPAF2Q8N5M1 289 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 GPATCH11Q8N954 259 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 Q8N9G6 341 aaPredicted RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 OR4L1Q8NH43 312 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 MIPOL1Q8TD10 442 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 RAB7BQ96AH8 199 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 BMFQ96LC9 184 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 CSPG4P5Q96PW8 444 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 PEBP4Q96S96 227 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 SPXQ9BT56 116 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 APOOQ9BUR5 198 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 PARLQ9H300 379 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TUBB1Q9H4B7 451 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 SYTL2Q9HCH5 934 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 ETNK2Q9NVF9 386 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 RBM22Q9NW64 420 aaKnown RBP eCLIP3.47□□□□□ -1.85
HTT-210ENST00000512909 SPASTQ9UBP0 616 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 FAM153AQ9UHL3 310 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TRMT6Q9UJA5 497 aaKnown RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 APPL1Q9UKG1 709 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 RARRES3Q9UL19 164 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 MFHAS1Q9Y4C4 1052 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 FADS3Q9Y5Q0 445 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 CUL9Q8IWT3 2517 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 XIRP2A4UGR9 3374 aa3.46□□□□□ -1.85
HTT-210ENST00000512909 A0A0U1RQS6 177 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 H7C0C1 242 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 YKT6O15498 198 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 AQP9O43315 295 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PROSCO94903 275 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 SYNGR4O95473 234 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PROS1P07225 676 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 OR9G9P0C7N8 305 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 CCNB1P14635 433 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 KDELR1P24390 212 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PCK1P35558 622 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 CYLC1P35663 651 aaPredicted RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 GPR1P46091 355 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 ATP5OP48047 213 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PITPNBP48739 271 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 CNN1P51911 297 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 RPS27AP62979 156 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 TRA2BP62995 288 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 ACY1Q03154 408 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PAX8Q06710 450 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 OVGP1Q12889 678 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 BNIP1Q12981 228 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 RFTN1Q14699 578 aaPredicted RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 SLC17A1Q14916 467 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 TMEM52BQ4KMG9 183 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PRAMEF7Q5VXH5 474 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 NEPROQ6NW34 567 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 ABRAXAS1Q6UWZ7 409 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PID1Q7Z2X4 250 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 EFL1Q7Z2Z2 1120 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 BNIPLQ7Z465 357 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 SLC25A42Q86VD7 318 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 GKN2Q86XP6 184 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 PSTKQ8IV42 348 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 VSTM4Q8IW00 320 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 SLC25A45Q8N413 288 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 OR1B1Q8NGR6 318 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 C11orf45Q8TAV5 145 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 RNASE8Q8TDE3 154 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 SAP25Q8TEE9 199 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 TOMM40LQ969M1 308 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 SLCO4A1Q96BD0 722 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 HAUS1Q96CS2 278 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 RAB39BQ96DA2 213 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 DTD2Q96FN9 168 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 ZNF641Q96N77 438 aaPredicted RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 RCHY1Q96PM5 261 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 FNDC4Q9H6D8 234 aaPredicted RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 LRRC19Q9H756 370 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 IL1RAPQ9NPH3 570 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 TAS2R16Q9NYV7 291 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 UVRAGQ9P2Y5 699 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 LHX3Q9UBR4 397 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 KCNN3Q9UGI6 736 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 APOBEC3BQ9UH17 382 aaKnown RBP3.46□□□□□ -1.86
HTT-210ENST00000512909 CD84Q9UIB8 345 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.46□□□□□ -1.86
HTT-210ENST00000512909 C5orf42Q9H799 3197 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 ANAPC1Q9H1A4 1944 aa3.46□□□□□ -1.86
HTT-210ENST00000512909 MUC6Q6W4X9 2439 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CDH23Q9H251 3354 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms