RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NMNAT2Q9BZQ4 307 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 GORASP2Q9H8Y8 452 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 SIAEQ9HAT2 523 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 IL21Q9HBE4 155 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 AQP9O43315 295 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 NAA10P41227 235 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 SIM1P81133 766 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 SF3B4Q15427 424 aaKnown RBP eCLIP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 MEX3BQ6ZN04 569 aaKnown RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 ASPGQ86U10 573 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PDZD3Q86UT5 571 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 LINC00471Q8N535 108 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 FNDC9Q8TBE3 224 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 BLNKQ8WV28 456 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 MCHR1Q99705 422 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 ACTL8Q9H568 366 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 OPA3Q9H6K4 179 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 TBX21Q9UL17 535 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 LRIT2A6NDA9 550 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 TFAP2AP05549 437 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 POLR2IP36954 125 aaKnown RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 DLX5P56178 289 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 TAS2R31P59538 309 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PSPHP78330 225 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PIN1Q13526 163 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 MLC1Q15049 377 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PLAC9Q5JTB6 97 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 C18orf63Q68DL7 685 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 RFPL4BQ6ZWI9 263 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 LMX1AQ8TE12 382 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 METTL21AQ8WXB1 218 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 LHPPQ9H008 270 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 METTL17Q9H7H0 456 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 MVB12BQ9H7P6 319 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 VSX1Q9NZR4 365 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PIAS3Q9Y6X2 628 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 POM121BA6NF01 834 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 H3BMQ9 156 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 H3BNC9 293 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 CXCL10P02778 98 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 HLA-DOBP13765 273 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PPP3CBP16298 524 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 PCP4P48539 62 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 EMP3P54852 163 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 FAM86B1Q8N7N1 296 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 OR13C2Q8NGS9 318 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 BTF3L4Q96K17 158 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 SPIN2AQ99865 258 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 SPIN2BQ9BPZ2 258 aa10.13□□□□□ -0.79
CPNE4-209ENST00000512055 TRBV2A0A0J9YWF9 115 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 ACTL6BO94805 426 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 CLEC3BP05452 202 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 PIM1P11309 404 aaPredicted RBP10.12□□□□□ -0.79
CPNE4-209ENST00000512055 CCR2P41597 374 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 FASLGP48023 281 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SF3A2Q15428 464 aaKnown RBP10.12□□□□□ -0.79
CPNE4-209ENST00000512055 BCL7AQ4VC05 210 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 TECPR1Q7Z6L1 1165 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 DNAJC5GQ8N7S2 189 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 FAM213BQ8TBF2 198 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 ECHDC3Q96DC8 303 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 ELF4Q99607 663 aaPredicted RBP10.12□□□□□ -0.79
CPNE4-209ENST00000512055 ORAI3Q9BRQ5 295 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 GRHPRQ9UBQ7 328 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 NOX1Q9Y5S8 564 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 CEP290O15078 2479 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 GJA4P35212 333 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 HBA1P69905 142 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 NNATQ16517 81 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SGCBQ16585 318 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 XKR7Q5GH72 579 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SERPINA11Q86U17 422 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 PXT1Q8NFP0 134 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 LMF1Q96S06 567 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 C12orf10Q9HB07 376 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 GDE1Q9NZC3 331 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 MMP12P39900 470 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SELENOWP63302 87 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 ARHGAP19Q14CB8 494 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 CEBPEQ15744 281 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 VWA1Q6PCB0 445 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 FJX1Q86VR8 437 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 ZNF683Q8IZ20 524 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 BRIX1Q8TDN6 353 aaKnown RBP10.12□□□□□ -0.79
CPNE4-209ENST00000512055 PIGQQ9BRB3 760 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 GPR174Q9BXC1 333 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SCPEP1Q9HB40 452 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SPHK1Q9NYA1 384 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 GPR83Q9NYM4 423 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 BTNL2Q9UIR0 455 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 LINC01553A4QN01 128 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 NUDT19A8MXV4 375 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 K7ESM1 405 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 IL1RNP18510 177 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 RHCEP18577 417 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 SLC10A1Q14973 349 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 TRIM61Q5EBN2 209 aa10.12□□□□□ -0.79
CPNE4-209ENST00000512055 CPZQ66K79 652 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms