RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 ITGB1BP1O14713 200 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 NBR2O15453 112 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 KDELR3O43731 214 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TPST2O60704 377 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 OR2F2O95006 317 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CST1P01037 141 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 RETP07949 1114 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PPIAL4FP0DN26 164 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 GP9P14770 177 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CPN1P15169 458 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TSPAN8P19075 237 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 IL32P24001 234 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 LMO2P25791 158 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 HOXA9P31269 272 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ID1P41134 155 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 MATKP42679 507 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 KCNJ3P48549 501 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ARRB1P49407 418 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 RPL27P61353 136 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PSMC5P62195 406 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 RPS27AP62979 156 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CDK16Q00536 496 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PAX5Q02548 391 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 SIGLEC14Q08ET2 396 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 STX5Q13190 355 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 MSLNQ13421 630 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ART3Q13508 389 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 EXOSC7Q15024 291 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 UAP1Q16222 522 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TMEM31Q5JXX7 168 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ZNF658Q5TYW1 1059 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 NEPROQ6NW34 567 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PAQR6Q6TCH4 344 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 NUFIP2Q7Z417 695 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 SCD5Q86SK9 330 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 SERPINA9Q86WD7 417 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CARM1Q86X55 608 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ITPRIPQ8IWB1 547 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 FBXL16Q8N461 479 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 C17orf78Q8N4C9 275 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 MLKLQ8NB16 471 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 OR10H4Q8NGA5 316 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 OR4D6Q8NGJ1 314 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 UBA3Q8TBC4 463 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CACNG8Q8WXS5 425 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PNPLA2Q96AD5 504 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 OPTNQ96CV9 577 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TM4SF19Q96DZ7 209 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 MRPL53Q96EL3 112 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 SH3YL1Q96HL8 342 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PLEKHA8Q96JA3 519 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ZNF597Q96LX8 424 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 AMDHD1Q96NU7 426 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TGM7Q96PF1 710 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TESK2Q96S53 571 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 NDUFAF3Q9BU61 184 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 TSGA10Q9BZW7 698 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 GFRA4Q9GZZ7 299 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PCNX3Q9H6A9 2034 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 DHX33Q9H6R0 707 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 NT5DC2Q9H857 520 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 MYOZ2Q9NPC6 264 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 SMOXQ9NWM0 555 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 MS4A12Q9NXJ0 267 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 IL37Q9NZH6 218 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 STOX2Q9P2F5 926 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PSMC3IPQ9P2W1 217 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 THAP10Q9P2Z0 257 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 DCDC2Q9UHG0 476 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ABCG2Q9UNQ0 655 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 DIMT1Q9UNQ2 313 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CFL2Q9Y281 166 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PPIAL4AQ9Y536 164 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 PUS1Q9Y606 427 aaKnown RBP eCLIP3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 CPQQ9Y646 472 aa3.23□□□□□ -1.89
CALCOCO2-220ENST00000511816 ATP10DQ9P241 1426 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 TRBV11-1A0A0K0K1C0 115 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 A0A1W2PQ72 361 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 RNF222A6NCQ9 220 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 OR6C70A6NIJ9 312 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 SRRM4A7MD48 611 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 E9PMD0 336 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 SGK494L7N484 410 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 PDLIM1O00151 329 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 RAD51BO15315 384 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 RS1O15537 224 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 COCHO43405 550 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 DUSP11O75319 330 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 IGHG1P01857 330 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 ALOX5P09917 674 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 HSMCR30P0CW71 290 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 HOXB8P17481 243 aaPredicted RBP3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 PSMB6P28072 239 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 LAP3P28838 519 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 GTF2E2P29084 291 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 GNA11P29992 359 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 HMOX2P30519 316 aa3.22□□□□□ -1.89
CALCOCO2-220ENST00000511816 PRKAR2BP31323 418 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms