RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ARFIP2P53365 341 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 RPL38P63173 70 aaKnown RBP16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 SLC17A1Q14916 467 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 GPR68Q15743 365 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 ATP6AP1LQ52LC2 224 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 SVOPLQ8N434 492 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 FAM71CQ8NEG0 241 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 PSMA8Q8TAA3 256 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 ZHX1-C8orf76Q96EF9 292 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 BOD1Q96IK1 185 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 KATNB1Q9BVA0 655 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 HIF1ANQ9NWT6 349 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 HDGFL3Q9Y3E1 203 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 DNPH1O43598 174 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 URI1O94763 535 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 CSTAP01040 98 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 AVPP01185 164 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 BCKDHAP12694 445 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 IFNGR1P15260 489 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 CCNA2P20248 432 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 THBS4P35443 961 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 TGFBR3Q03167 851 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 TBRG1Q3YBR2 411 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 LIPMQ5VYY2 423 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 ANKRD16Q6P6B7 361 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 GLCCI1Q86VQ1 547 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 CDK20Q8IZL9 346 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 OR5AK3PQ8NH89 298 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 UBASH3BQ8TF42 649 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 TMEM234Q8WY98 164 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF385AQ96PM9 386 aaKnown RBP16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 ESM1Q9NQ30 184 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 GIMAP2Q9UG22 337 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 ATP6V1HQ9UI12 483 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 MKLN1Q9UL63 735 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 PCDHB10Q9UN67 800 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 FAF1Q9UNN5 650 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 SLC9A8Q9Y2E8 581 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 PCDHGB1Q9Y5G3 927 aa16.45■□□□□ 0.22
HMGCS1-206ENST00000511774 SH3PXD2BA1X283 911 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 B4DSR2 109 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 CRCPO75575 148 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 C6orf47O95873 294 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 CELA3BP08861 270 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 UROSP10746 265 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 PGM1P36871 562 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 APOBEC1P41238 236 aaKnown RBP16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 KLHL24Q6TFL4 600 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 LINGO2Q7L985 606 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 OR56A1Q8NGH5 318 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 OR1K1Q8NGR3 316 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 CLDND2Q8NHS1 167 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF418Q8TF45 676 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 WDR60Q8WVS4 1066 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 NEU4Q8WWR8 484 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 TMEM186Q96B77 213 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 SAP130Q9H0E3 1048 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 NELFAQ9H3P2 528 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 NARFLQ9H6Q4 476 aa16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 CRNNQ9UBG3 495 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-206ENST00000511774 SLC28A1O00337 649 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 LSM1O15116 133 aaKnown RBP16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 SCAMP2O15127 329 aaKnown RBP16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 SKAP2O75563 359 aaPredicted RBP16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 LGI1O95970 557 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 IGLV1-44P01699 117 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 CRYAAP02489 173 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 LINC00032P0C843 101 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 RYKP34925 604 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 ADRM1Q16186 407 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 MSMPQ1L6U9 139 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 EMBQ6PCB8 327 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 ZYG11AQ6WRX3 759 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 USP43Q70EL4 1123 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 CLEC4FQ8N1N0 589 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 BCL2L2Q92843 193 aaPredicted RBP16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 TMEM45BQ96B21 275 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 MTERF3Q96E29 417 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 RACGAP1Q9H0H5 632 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 TPK1Q9H3S4 243 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF696Q9H7X3 374 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 PARPBPQ9NWS1 579 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 TMEM181Q9P2C4 612 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 PYCARDQ9ULZ3 195 aa16.43■□□□□ 0.22
HMGCS1-206ENST00000511774 ZC3H12DA2A288 527 aaKnown RBP16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 TRIM77I1YAP6 450 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 GSTA1P08263 222 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 CREB1P16220 341 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 EPHA1P21709 976 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 PCMT1P22061 227 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 ECHS1P30084 290 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 SLC1A3P43003 542 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 C1QTNF12Q5T7M4 302 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 SPATA21Q7Z572 469 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 NUP37Q8NFH4 326 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 OR5P2Q8WZ92 322 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 ZG16BQ96DA0 208 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 AURKBQ96GD4 344 aaPredicted RBP16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 KCNS3Q9BQ31 491 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms