RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PEPDP12955 493 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 PRKCAP17252 672 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 FUT1P19526 365 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 EIF1P41567 113 aaKnown RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SLC15A1P46059 708 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 RTP5Q14D33 572 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 TBCEQ15813 527 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 ARMC4Q5T2S8 1044 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SLC22A10Q63ZE4 541 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SLC46A3Q7Z3Q1 461 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 GID4Q8IVV7 300 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 OR13C2Q8NGS9 318 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 OR4Q3Q8NH05 313 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 NANSQ9NR45 359 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 CMC2Q9NRP2 79 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 MRPS18AQ9NVS2 196 aaKnown RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 PAK1IP1Q9NWT1 392 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SPIN1Q9Y657 262 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 TMED7-TICAM2A0A0A6YYA0 188 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 KDM4EB2RXH2 506 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 ZNF701M0R085 212 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 ARPC3O15145 178 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 NPIPB7O75200 414 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 IFNGP01579 166 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 CDK1P06493 297 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 HTR1AP08908 422 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 TSPAN19P0C672 248 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 ASAH2BP0C7U1 165 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 EGR4Q05215 589 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 Q0VFX4 171 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SYT14P1Q58G82 188 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 CLEC12AQ5QGZ9 265 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 ACER2Q5QJU3 275 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 DCAF10Q5QP82 559 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 FAM69AQ5T7M9 428 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 RNLSQ5VYX0 342 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 NXNL2Q5VZ03 156 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 IL20RBQ6UXL0 311 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 DPY19L2P2Q6ZN68 376 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 GPR141Q7Z602 305 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 THAP4Q8WY91 577 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 ZBTB8AQ96BR9 441 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 TMEM41AQ96HV5 264 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 LRR1Q96L50 414 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 IL4I1Q96RQ9 567 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 MCCC2Q9HCC0 563 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 GALNT9Q9HCQ5 603 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 TMED7Q9Y3B3 224 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 SUSD5O60279 629 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 SDHBP21912 280 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 RRADP55042 308 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 FHL1Q13642 323 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 ATP1A4Q13733 1029 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 TOMM34Q15785 309 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-209ENST00000511426 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.81□□□□□ -0.2
SCLT1-209ENST00000511426 CRTC2Q53ET0 693 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-209ENST00000511426 KLHL22Q53GT1 634 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 AHSA2Q719I0 299 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 SATL1Q86VE3 508 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 MEX3DQ86XN8 651 aaKnown RBP13.81□□□□□ -0.2
SCLT1-209ENST00000511426 PLCZ1Q86YW0 608 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 CLEC1AQ8NC01 280 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 OR2M3Q8NG83 312 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 GGHQ92820 318 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 DGCR14Q96DF8 476 aaKnown RBP13.81□□□□□ -0.2
SCLT1-209ENST00000511426 CDCA4Q9BXL8 241 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 SERINC1Q9NRX5 453 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 CHRNA9Q9UGM1 479 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 KLHL21Q9UJP4 597 aa13.81□□□□□ -0.2
SCLT1-209ENST00000511426 CDV3Q9UKY7 258 aaKnown RBP13.81□□□□□ -0.2
SCLT1-209ENST00000511426 IMPA2O14732 288 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 SNPHO15079 494 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 ENTPD6O75354 484 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 AHSA1O95433 338 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 CH25HO95992 272 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 HIST1H2ABP04908 130 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 ZNF3P17036 446 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 PCMT1P22061 227 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 CASRP41180 1078 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 CLK1P49759 484 aaKnown RBP13.8□□□□□ -0.2
SCLT1-209ENST00000511426 XAF1Q6GPH4 301 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 HIST3H2AQ7L7L0 130 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 MAMDC2Q7Z304 686 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-209ENST00000511426 ADGRG3Q86Y34 549 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 STX19Q8N4C7 294 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 ANKK1Q8NFD2 765 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 OR4K17Q8NGC6 315 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 OR51A7Q8NH64 312 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 SLC25A43Q8WUT9 341 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-209ENST00000511426 HIST1H2ACQ93077 130 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 DDIT4LQ96D03 193 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 C1GALT1C1Q96EU7 318 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 TNFRSF13CQ96RJ3 184 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 IFT27Q9BW83 186 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 CCDC90BQ9GZT6 254 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 LHPPQ9H008 270 aa13.8□□□□□ -0.2
SCLT1-209ENST00000511426 SACM1LQ9NTJ5 587 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms