RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 HTRA1Q92743 480 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 ZG16BQ96DA0 208 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 BOD1Q96IK1 185 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 OR11A1Q9GZK7 315 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 MANSC1Q9H8J5 431 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 SLC17A5Q9NRA2 495 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 NOP53Q9NZM5 478 aaKnown RBP20.02■□□□□ 0.8
SMAD5-207ENST00000511116 FLVCR1Q9Y5Y0 555 aa20.02■□□□□ 0.8
SMAD5-207ENST00000511116 OR12D1P0DN82 309 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 SLC25A3Q00325 362 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 PGS1Q32NB8 556 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 KRTAP24-1Q3LI83 254 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 SAXO2Q658L1 398 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 CYB5R2Q6BCY4 276 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 ZNF563Q8TA94 476 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 TCP10LQ8TDR4 215 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 ROPN1LQ96C74 230 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 TMEM181Q9P2C4 612 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 LGALS13Q9UHV8 139 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 AMDHD2Q9Y303 409 aa20.01■□□□□ 0.79
SMAD5-207ENST00000511116 PRAMEF27A3QJZ7 478 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 VWC2LB2RUY7 222 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 NUDT17P0C025 328 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 APOBEC3AP31941 199 aaPredicted RBP20■□□□□ 0.79
SMAD5-207ENST00000511116 MAGEA8P43361 318 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 PHC1P78364 1004 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 KCNJ10P78508 379 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 SWI5Q1ZZU3 235 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 ATAD3BQ5T9A4 648 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20■□□□□ 0.79
SMAD5-207ENST00000511116 BEX2Q9BXY8 128 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 FKRPQ9H9S5 495 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 SLC7A10Q9NS82 523 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 PCDHGB4Q9UN71 923 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 SLC9A8Q9Y2E8 581 aa20■□□□□ 0.79
SMAD5-207ENST00000511116 ZNF208O43345 1280 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 EIF1BO60739 113 aaKnown RBP19.99■□□□□ 0.79
SMAD5-207ENST00000511116 IMPDH2P12268 514 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 BMP4P12644 408 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 USF1P22415 310 aaPredicted RBP19.99■□□□□ 0.79
SMAD5-207ENST00000511116 UQCRC2P22695 453 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 RYKP34925 604 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 HTR3AP46098 478 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 CHRNB3Q05901 458 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 SLC17A1Q14916 467 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 MST1LQ2TV78 715 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 OR4A15Q8NGL6 344 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 XAGE5Q8WWM1 108 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 RAB8BQ92930 207 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 TMEM45BQ96B21 275 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 NEURL3Q96EH8 262 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 PARPBPQ9NWS1 579 aa19.99■□□□□ 0.79
SMAD5-207ENST00000511116 PRSS51A0A1B0GVH4 220 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 CLDN24A6NM45 220 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 FAAHO00519 579 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 BPGMP07738 259 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 ZNF16P17020 682 aaPredicted RBP19.98■□□□□ 0.79
SMAD5-207ENST00000511116 MAP2K6P52564 334 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 OR2B6P58173 313 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 SLC35A1P78382 337 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 LSM11P83369 360 aaKnown RBP eCLIP19.98■□□□□ 0.792e-6■■■□□ 15.4
SMAD5-207ENST00000511116 TSPO2Q5TGU0 170 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 TNFAIP8L2Q6P589 184 aaPredicted RBP19.98■□□□□ 0.79
SMAD5-207ENST00000511116 CASP12Q6UXS9 341 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 CMIPQ8IY22 773 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 ARFGAP2Q8N6H7 521 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 TESCQ96BS2 214 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 C1QTNF6Q9BXI9 259 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 SHARPINQ9H0F6 387 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.98■□□□□ 0.79
SMAD5-207ENST00000511116 OSGIN1Q9UJX0 560 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 ATP23Q9Y6H3 246 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 PMF1-BGLAPU3KQ54 211 aa19.98■□□□□ 0.79
SMAD5-207ENST00000511116 TMED7-TICAM2A0A0A6YYA0 188 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 TLDC2A0PJX2 215 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 LMX1BO60663 402 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 SPAG7O75391 227 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 MPGP29372 298 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 ETV4P43268 484 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 IDH2P48735 452 aaKnown RBP19.97■□□□□ 0.79
SMAD5-207ENST00000511116 GZMKP49863 264 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 TGFBR3Q03167 851 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 CASP8Q14790 479 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 PAQR6Q6TCH4 344 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 CNOT9Q92600 299 aaKnown RBP19.97■□□□□ 0.79
SMAD5-207ENST00000511116 PMM1Q92871 262 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 DNAJA3Q96EY1 480 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 TMED7Q9Y3B3 224 aa19.97■□□□□ 0.79
SMAD5-207ENST00000511116 TMEM72A0PK05 275 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 NDUFS8O00217 210 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 AP3D1O14617 1153 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 IGFBP5P24593 272 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 KHKP50053 298 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 POLR2HP52434 150 aaKnown RBP19.96■□□□□ 0.79
SMAD5-207ENST00000511116 ANXA8L1Q5VT79 327 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 ZIC4Q8N9L1 334 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 DDIT4LQ96D03 193 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 PIF1Q9H611 641 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 AKTIPQ9H8T0 292 aa19.96■□□□□ 0.79
SMAD5-207ENST00000511116 UPB1Q9UBR1 384 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms