RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PRSS36Q5K4E3 855 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TEPPQ6URK8 271 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PEX26Q7Z412 305 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MRPL10Q7Z7H8 261 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ATPAF2Q8N5M1 289 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MAB21L3Q8N8X9 362 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 POC1AQ8NBT0 407 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR5AK3PQ8NH89 298 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TCTEX1D2Q8WW35 142 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ATG4AQ8WYN0 398 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SUSD6Q92537 303 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TTC9Q92623 222 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DVL3Q92997 716 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR2A14Q96R47 310 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR6C1Q96RD1 312 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TCEAL7Q9BRU2 100 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 THTPAQ9BU02 230 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GPR174Q9BXC1 333 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CTPS2Q9NRF8 586 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MED11Q9P086 117 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF346Q9UL40 294 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 B3GNT3Q9Y2A9 372 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PCYT1BQ9Y5K3 369 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PSMB11A5LHX3 300 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C11orf98E9PRG8 122 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TERTO14746 1132 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HCRTR2O43614 444 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SCO2O43819 266 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FCGR3BO75015 233 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ECI2O75521 394 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FCN3O75636 299 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 KNG1P01042 644 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NGFRP08138 427 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CDH1P12830 882 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NPR2P20594 1047 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SDHAP31040 664 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GKP32189 559 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SRPXP78539 464 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DLK1P80370 383 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ST3GAL3Q11203 375 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PON3Q15166 354 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SF3B4Q15427 424 aaKnown RBP eCLIP3.61□□□□□ -1.831e-17■■■■■ 61.1
NEDD4-209ENST00000508871 CERS6Q6ZMG9 384 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FAM214BQ7L5A3 538 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SHFQ7M4L6 423 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RANBP3LQ86VV4 465 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TP53INP2Q8IXH6 220 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FAM20CQ8IXL6 584 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 BPIFB2Q8N4F0 458 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 KLHDC9Q8NEP7 349 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF564Q8TBZ8 553 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RDH11Q8TC12 318 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RAB39BQ96DA2 213 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 METTL2AQ96IZ6 378 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CNBD2Q96M20 576 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR2M4Q96R27 311 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ALOXE3Q9BYJ1 711 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NAA50Q9GZZ1 169 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RAB1BQ9H0U4 201 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NMNAT1Q9HAN9 279 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ISYNA1Q9NPH2 558 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HRASLS2Q9NWW9 162 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR1A1Q9P1Q5 309 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RCOR3Q9P2K3 495 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PISDQ9UG56 409 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 UBQLN1Q9UMX0 589 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SLC6A5Q9Y345 797 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MYO16Q9Y6X6 1858 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 A0A0J9YYE9 177 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1B0GW55 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM150BA6NC51 233 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 A8MVM7 634 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 LRCH4O75427 683 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TRBC1P01850 177 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L2P0CJ85 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L3P0CJ86 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L4P0CJ87 422 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L5P0CJ88 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L6P0CJ89 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L7P0CJ90 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HLA-DMAP28067 261 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RBBP4Q09028 425 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ELAVL1Q15717 326 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PHLDA2Q53GA4 152 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SMUG1Q53HV7 270 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF773Q6PK81 442 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DUX4L9Q6RFH8 374 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C16orf89Q6UX73 402 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C8orf86Q6ZUL3 223 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MOB1BQ7L9L4 216 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR4K14Q8NGD5 310 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MCFD2Q8NI22 146 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HCAR2Q8TDS4 363 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 AENQ8WTP8 325 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 STACQ99469 402 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GPA33Q99795 319 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 COMMD4Q9H0A8 199 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GPR83Q9NYM4 423 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DNMT3BQ9UBC3 853 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms