RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PCDHB14Q9Y5E9 798 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 SPIN1Q9Y657 262 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 IGHV1-18A0A0C4DH31 117 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 B4DSR2 109 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 SLC28A1O00337 649 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ANKRD28O15084 1053 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 TMPRSS2O15393 492 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CRCPO75575 148 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 TFPIP10646 304 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 UROSP10746 265 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 DAOP14920 347 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 DDX5P17844 614 aaKnown RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 RBMXP38159 391 aaKnown RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 APOBEC1P41238 236 aaKnown RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ASMTP46597 345 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CCT3P49368 545 aaKnown RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 KHKP50053 298 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 LGALS3BPQ08380 585 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 IFFO1Q0D2I5 559 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 RIN1Q13671 783 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF141Q15928 474 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 C3orf36Q3SXR2 165 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CEP85LQ5SZL2 805 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 PDZK1Q5T2W1 519 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 TSPO2Q5TGU0 170 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 C9orf135Q5VTT2 229 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 RINLQ6ZS11 566 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 RNF165Q6ZSG1 346 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 FRMD7Q6ZUT3 714 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 USP43Q70EL4 1123 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 R3HCC1LQ7Z5L2 792 aaKnown RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CCDC103Q8IW40 242 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CCNYL1Q8N7R7 359 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 OR56A1Q8NGH5 318 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF418Q8TF45 676 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ZBTB9Q96C00 473 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ARL5BQ96KC2 179 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 SNX18Q96RF0 628 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 SDF2Q99470 211 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 KCNS3Q9BQ31 491 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CCDC106Q9BWC9 280 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF696Q9H7X3 374 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 TNFRSF12AQ9NP84 129 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 GPATCH2Q9NW75 528 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 CHRNA9Q9UGM1 479 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 FAF1Q9UNN5 650 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-211ENST00000508546 TRAPPC4Q9Y296 219 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 SLC9A8Q9Y2E8 581 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 FLVCR1Q9Y5Y0 555 aa8.16□□□□□ -1.1
NEDD9-211ENST00000508546 TRIM77I1YAP6 450 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 CRYAAP02489 173 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-211ENST00000508546 GSTA1P08263 222 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 ABHD2P08910 425 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 OR4A8P0C604 315 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 MYZAPP0CAP1 466 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 NEFHP12036 1026 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 EFNA1P20827 205 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-211ENST00000508546 HILS1P60008 231 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 TP53BP2Q13625 1128 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 SPATA19Q7Z5L4 167 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 GLCCI1Q86VQ1 547 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 LRRC17Q8N6Y2 441 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 POMGNT2Q8NAT1 580 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 OR4F15Q8NGB8 312 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 SFXN5Q8TD22 340 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 TMEM45BQ96B21 275 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 PKNOX2Q96KN3 472 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 SLC38A2Q96QD8 506 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 OR7D2Q96RA2 312 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 RBM4Q9BWF3 364 aaKnown RBP8.15□□□□□ -1.1
NEDD9-211ENST00000508546 TMEM181Q9P2C4 612 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 CRNNQ9UBG3 495 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-211ENST00000508546 BAIAP2L1Q9UHR4 511 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 ATP6V1HQ9UI12 483 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 KCNE5Q9UJ90 142 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 TMED5Q9Y3A6 229 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 SPEF1Q9Y4P9 236 aa8.15□□□□□ -1.1
NEDD9-211ENST00000508546 A0A087WUV0 522 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 SCAMP2O15127 329 aaKnown RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 EIF1BO60739 113 aaKnown RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 STX11O75558 287 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 CYP7B1O75881 506 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ALX3O95076 343 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 AK1P00568 194 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 CSTAP01040 98 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 SHBGP04278 402 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 UBTFL6P0CB48 400 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 RPL3P39023 403 aaKnown RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 SLC1A3P43003 542 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 LIMS1P48059 325 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ARFIP2P53365 341 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 NAAAQ02083 359 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 SLC17A1Q14916 467 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 TRIP10Q15642 601 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 KRT71Q3SY84 523 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 RFTN2Q52LD8 501 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 HIKESHIQ53FT3 197 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 AP1ARQ63HQ0 302 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms