RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	FIS1	Q9Y3D6	152 aa		4.89	□□□□□ -1.63
ATXN3-210	ENST00000507965	CCL27	Q9Y4X3	112 aa		4.89	□□□□□ -1.63
ATXN3-210	ENST00000507965	SON	P18583	2426 aa	Known RBP	4.89	□□□□□ -1.63
ATXN3-210	ENST00000507965	ROS1	P08922	2347 aa		4.89	□□□□□ -1.63
ATXN3-210	ENST00000507965	CENPVL1	A0A0U1RR11	272 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965		A0A1W2PPM1	405 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965		A0A1W2PR80	420 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965		C9JVG2	144 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	KIF2A	O00139	706 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ABCD4	O14678	606 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	SMAD9	O15198	467 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	TMCC2	O75069	709 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	SEC22B	O75396	215 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	RSL1D1	O76021	490 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	H6PD	O95479	791 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	IGHV3-9	P01782	118 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	NGFR	P08138	427 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	MAK	P20794	623 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ME2	P23368	584 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	IDUA	P35475	653 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	FRK	P42685	505 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	MANF	P55145	182 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CDH11	P55287	796 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CARD18	P57730	90 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	RPL38	P63173	70 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	IRX1	P78414	480 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CKAP4	Q07065	602 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	PDE7A	Q13946	482 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	KIAA0040	Q15053	153 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	P2RY6	Q15077	328 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ETFDH	Q16134	617 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	KRTAP24-1	Q3LI83	254 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CPTP	Q5TA50	214 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CDC73	Q6P1J9	531 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	PODNL1	Q6PEZ8	512 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ZYG11A	Q6WRX3	759 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	B3GLCT	Q6Y288	498 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965		Q6ZSN1	163 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	IL17REL	Q6ZVW7	336 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	FCRLA	Q7L513	359 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	OLIG3	Q7RTU3	272 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	MTERF4	Q7Z6M4	381 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	TRABD2A	Q86V40	505 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	LDLRAD3	Q86YD5	345 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	SLC22A9	Q8IVM8	553 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	TMCO5A	Q8N6Q1	288 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ZNF525	Q8N782	197 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	STPG3	Q8N7X2	389 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	COX18	Q8N8Q8	333 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CDRT4	Q8N9R6	151 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	SVIP	Q8NHG7	77 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	B4GALNT2	Q8NHY0	566 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	KIF18A	Q8NI77	898 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	IL17D	Q8TAD2	202 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	FAM110B	Q8TC76	370 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ACTRT2	Q8TDY3	377 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ZFP90	Q8TF47	636 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CPNE4	Q96A23	557 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	PPCDC	Q96CD2	204 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	FAM120B	Q96EK7	910 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	DNAJA3	Q96EY1	480 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	TRMT61A	Q96FX7	289 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	HS6ST2	Q96MM7	605 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	PSD2	Q9BQI7	771 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CACNG6	Q9BXT2	260 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	OR10A4	Q9H209	315 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	TUBB1	Q9H4B7	451 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ESRP2	Q9H6T0	727 aa	Known RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	MANSC1	Q9H8J5	431 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	C3orf14	Q9HBI5	128 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	LRTM1	Q9HBL6	345 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	GLRX2	Q9NS18	164 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	TBK1	Q9UHD2	729 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	BAIAP2L1	Q9UHR4	511 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ICAM5	Q9UMF0	924 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	NFU1	Q9UMS0	254 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	B3GALT5	Q9Y2C3	310 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	CARD8	Q9Y2G2	431 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	KCNE3	Q9Y6H6	103 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	COL6A5	A8TX70	2615 aa		4.88	□□□□□ -1.63
ATXN3-210	ENST00000507965	ABCA1	O95477	2261 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965		A0A1W2PQD3	144 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	FAM234B	A2RU67	622 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	CCDC151	A5D8V7	595 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965		A8MV72	311 aa	Predicted RBP	4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	TMEM233	B4DJY2	109 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	ZNF195	O14628	629 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	RIPK2	O43353	540 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	TLX2	O43763	284 aa	Predicted RBP	4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	CRCP	O75575	148 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	RAD51D	O75771	328 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	LY6H	O94772	140 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	SLU7	O95391	586 aa	Known RBP	4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	NUDT14	O95848	222 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	HMGN2	P05204	90 aa	Known RBP	4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	IFI6	P09912	130 aa		4.87	□□□□□ -1.63
ATXN3-210	ENST00000507965	ALOX5	P09917	674 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms