RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HSD11B1LQ7Z5J1 315 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 GPR65Q8IYL9 337 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 LYG1Q8N1E2 194 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 LRRC43Q8N309 656 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 SYAP1Q96A49 352 aaPredicted RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 TM2D1Q9BX74 207 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 COG4Q9H9E3 785 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 CALHM2Q9HA72 323 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 PALMDQ9NP74 551 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 ABCD2Q9UBJ2 740 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 ZNF107Q9UII5 783 aaPredicted RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 PTPRSQ13332 1948 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 CHD6Q8TD26 2715 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 ANKRD11Q6UB99 2663 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 IGSF9BQ9UPX0 1349 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 KMT2BQ9UMN6 2715 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 OTOGLQ3ZCN5 2332 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 MYH7P12883 1935 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 ERICH2A1L162 156 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 ZBTB5O15062 677 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 DUX1O43812 170 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 RAMP1O60894 148 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 STX11O75558 287 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 NOL4O94818 638 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 CSF2P04141 144 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 RETP07949 1114 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 H2AFXP16104 143 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 ACAA2P42765 397 aaKnown RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 MAGEA5P43359 124 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 CRYBB1P53674 252 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 SNAP25P60880 206 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 TRDNQ13061 729 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 PEX6Q13608 980 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 SERTAD2Q14140 314 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 MAPK6Q16659 721 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 TMEM52BQ4KMG9 183 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 LINC01620Q4KN68 170 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 RIPPLY2Q5TAB7 128 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 MARC1Q5VT66 337 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 ZNF57Q68EA5 555 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 LRRC70Q7Z2Q7 622 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 MARCH9Q86YJ5 346 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 GRAMD2AQ8IUY3 354 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 BPIFB2Q8N4F0 458 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 TEX9Q8N6V9 391 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 FADS6Q8N9I5 356 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 KLHL30-AS1Q8NEE0 82 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 OR5AU1Q8NGC0 362 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 DNAJB3Q8WWF6 145 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 OR5M11Q96RB7 305 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 LZTS2Q9BRK4 669 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 ELOVL4Q9GZR5 314 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 GLT8D2Q9H1C3 349 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 POLR3FQ9H1D9 316 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 OPN3Q9H1Y3 402 aaPredicted RBP4.49□□□□□ -1.69
HERC4-213ENST00000506515 RHOJQ9H4E5 214 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 POMKQ9H5K3 350 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 EPS15L1Q9UBC2 864 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 LAMP5Q9UJQ1 280 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 RNF6Q9Y252 685 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 NCOR2Q9Y618 2525 aa4.49□□□□□ -1.69
HERC4-213ENST00000506515 ERI2A8K979 691 aaKnown RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 SLC17A2O00624 439 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 TSC22D2O75157 780 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 PCCBP05166 539 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 H2AFZP0C0S5 128 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 CD52P31358 61 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 IL2RGP31785 369 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 CDH5P33151 784 aaPredicted RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 CA8P35219 290 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 RPS9P46781 194 aaKnown RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 SLC25A1P53007 311 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 ERVPABLB-1P60509 514 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 CXCL6P80162 114 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 NCBP1Q09161 790 aaKnown RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 MGAT3Q09327 533 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 ZNF239Q16600 458 aaKnown RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 CYP51A1Q16850 503 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 ZSCAN4Q8NAM6 433 aaPredicted RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 OR10T2Q8NGX3 314 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 CNIH3Q8TBE1 160 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 ADAMTS16Q8TE57 1224 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 AKR1E2Q96JD6 320 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 C4orf36Q96KX1 117 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 GPA33Q99795 319 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 MIEF1Q9NQG6 463 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 CGNQ9P2M7 1197 aaKnown RBP4.48□□□□□ -1.69
HERC4-213ENST00000506515 GALPQ9UBC7 116 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 GMPPBQ9Y5P6 360 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 MYH6P13533 1939 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 SPTBN2O15020 2390 aa4.48□□□□□ -1.69
HERC4-213ENST00000506515 FASNP49327 2511 aaKnown RBP4.47□□□□□ -1.69
HERC4-213ENST00000506515 CNOT1A5YKK6 2376 aaKnown RBP4.47□□□□□ -1.69
HERC4-213ENST00000506515 FANCMQ8IYD8 2048 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 A0A1W2PQ72 361 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 FRG2CA6NGY1 282 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms