RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MRPL15Q9P015 296 aaKnown RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 ARID1AO14497 2285 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 TMED7-TICAM2A0A0A6YYA0 188 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 CIB4A0PJX0 185 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 TMEM72A0PK05 275 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZC3H12DA2A288 527 aaKnown RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 ARHGAP33O14559 1287 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 SLC2A10O95528 541 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 OR3A3P47888 321 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 OR3A2P47893 321 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 CD97P48960 835 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 GPR85P60893 370 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 EIF2B1Q14232 305 aaKnown RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 MELKQ14680 651 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 GLYR1Q49A26 553 aaPredicted RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 TMEM71Q6P5X7 295 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 RASD2Q96D21 266 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 SP140LQ9H930 580 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 TMED7Q9Y3B3 224 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZSWIM8A7E2V4 1837 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 TRAV6A0A075B6T7 132 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 CTDSP2O14595 271 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 YKT6O15498 198 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 OR8G3PP0DMU2 310 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 RAB3BP20337 219 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 MAKP20794 623 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 SEC23BQ15437 767 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZXDCQ2QGD7 858 aaPredicted RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 RAB11FIP2Q7L804 512 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 CAMKMTQ7Z624 323 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 NT5CQ8TCD5 201 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF578Q96N58 590 aaPredicted RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 INTS14Q96SY0 518 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ARHGAP9Q9BRR9 750 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 BABAM2Q9NXR7 383 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 R4GN57 208 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 H0YIG0 161 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 MEN1O00255 615 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 DOK2O60496 412 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 FPR3P25089 353 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF45Q02386 682 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 SLX4IPQ5VYV7 408 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 FBXO34Q9NWN3 711 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 SIRT5Q9NXA8 310 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 ADAM18Q9Y3Q7 739 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 DCDC2BA2VCK2 349 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 METTL21EPA6NDL7 271 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 CHP2O43745 196 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 NUDT21O43809 227 aaKnown RBP12.99□□□□□ -0.33
TCOF1-207ENST00000504761 PCSK6P29122 969 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 IDUAP35475 653 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 C17orf67Q0P5P2 114 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 ACSM3Q53FZ2 586 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 C9orf135Q5VTT2 229 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF613Q6PF04 617 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 ALDH16A1Q8IZ83 802 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 OR7G1Q8NGA0 311 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 NPRL2Q8WTW4 380 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 LMF1Q96S06 567 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 BCL2L10Q9HD36 194 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 A8MV72 311 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-207ENST00000504761 PLP2Q04941 152 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 SOWAHCQ53LP3 525 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-207ENST00000504761 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 GINS4Q9BRT9 223 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 GPN2Q9H9Y4 310 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-207ENST00000504761 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
TCOF1-207ENST00000504761 FARSAQ9Y285 508 aaKnown RBP12.99□□□□□ -0.33
TCOF1-207ENST00000504761 PMF1-BGLAPU3KQ54 211 aa12.99□□□□□ -0.33
TCOF1-207ENST00000504761 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ZGLP1P0C6A0 271 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 SLC1A3P43003 542 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CTBP2P56545 445 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CAMK2DQ13557 499 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 LANCL3Q6ZV70 420 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 UBE3DQ7Z6J8 389 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 RPS19BP1Q86WX3 136 aaKnown RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 MUL1Q969V5 352 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 FAM71F1Q96KD3 344 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CENPOQ9BU64 300 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CDCP1Q9H5V8 836 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 PATE3B3GLJ2 98 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 LTBRP36941 435 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 LIPAP38571 399 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CD83Q01151 205 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 DUSP8Q13202 625 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 AGERQ15109 404 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 MTFR2Q6P444 385 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 PAQR6Q6TCH4 344 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 TMED4Q7Z7H5 227 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 OR4C3Q8NH37 302 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CCNL2Q96S94 520 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 OR11A1Q9GZK7 315 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms