RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 OR2V1Q8NHB1 315 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 GEMIN6Q8WXD5 167 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC47A1Q96FL8 570 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 CLPTM1LQ96KA5 538 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 POLR2J2Q9GZM3 115 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 POLR2J3Q9H1A7 115 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 TIGARQ9NQ88 270 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 CLCF1Q9UBD9 225 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ERRFI1Q9UJM3 462 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 HDGFL3Q9Y3E1 203 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF175Q9Y473 711 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ICE1Q9Y2F5 2266 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 TENM4Q6N022 2769 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ALPK2Q86TB3 2170 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TMEM72A0PK05 275 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TRAPPC13A5PLN9 417 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MBD3L4A6NDZ8 208 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MBD3L3A6NE82 208 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MBD3L5A6NJ08 208 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 SEMA7AO75326 666 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TFPIP10646 304 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 CCNA2P20248 432 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC7A1P30825 629 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TIMP3P35625 211 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 EIF1AXP47813 144 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 CARD18P57730 90 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 NUP107P57740 925 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 RAC3P60763 192 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MS4A2Q01362 244 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 SRSF1Q07955 248 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 PMPCAQ10713 525 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TRAP1Q12931 704 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 SGCBQ16585 318 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MTX3Q5HYI7 312 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ALG10BQ5I7T1 473 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 RIPPLY2Q5TAB7 128 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 LCN8Q6JVE9 175 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TMPPEQ6ZT21 453 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 CCDC121Q6ZUS5 278 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 SEM1Q6ZVN7 128 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 FKBP9P1Q75LS8 142 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TSPYL5Q86VY4 417 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 RPRMLQ8N4K4 120 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MARVELD2Q8N4S9 558 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MBD3L2Q8NHZ7 208 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 STK35Q8TDR2 534 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ADAMTS16Q8TE57 1224 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 OSTF1Q92882 214 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 DDIT4LQ96D03 193 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ASB9Q96DX5 294 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 CCDC120Q96HB5 630 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF845Q96IR2 970 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 HSH2DQ96JZ2 352 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 OR5B2Q96R09 309 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TRIB1Q96RU8 372 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 CADM1Q9BY67 442 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 POTEKPQ9BYX7 375 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 MMADHCQ9H3L0 296 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 COQ10BQ9H8M1 238 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 SELENONQ9NZV5 590 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 TRAPPC4Q9Y296 219 aa10.68□□□□□ -0.7
PDLIM5-208ENST00000504489 A0A087WUJ7 227 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 A0A1W2PNR3 127 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 WIPF3A6NGB9 483 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 CPSF4LA6NMK7 179 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 A8MVM7 634 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 KDM4EB2RXH2 506 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 ACOT8O14734 319 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 DNPH1O43598 174 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 CHP2O43745 196 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 CXCL13O43927 109 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 NPIPB7O75200 414 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 PRKD3O94806 890 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 LYPD3O95274 346 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 PMS2P2O95744 297 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 IFNW1P05000 195 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 THRBP10828 461 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 CEACAM8P31997 349 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 CDH12P55289 794 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 ADORA2A-AS1P86434 159 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 MYBPHQ13203 477 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 C5orf46Q6UWT4 87 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 LINC00114Q6XXX2 140 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 DEF8Q6ZN54 512 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 DHFR2Q86XF0 187 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 FAM26EQ8N5C1 309 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 RND1Q92730 232 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 POP5Q969H6 163 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 CPNE4Q96A23 557 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 PYURFQ96I23 114 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 MPP4Q96JB8 637 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 ARL5BQ96KC2 179 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 ZFP3Q96NJ6 502 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 TM9SF2Q99805 663 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 AMBRA1Q9C0C7 1298 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 OR11A1Q9GZK7 315 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms