RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TBC1D3KA0A087X1G2 549 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 OR6C74A6NCV1 312 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 SYNDIG1LA6NDD5 238 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D3FA6NER0 549 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 CPSF4LA6NMK7 179 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 FAM170BA6NMN3 283 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 ISM1B1AKI9 464 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D3LB9A6J9 549 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 AIPO00170 330 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 MPZL2O60487 215 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBX19O60806 448 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 CH25HO95992 272 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D3HP0C7X1 549 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 GNSP15586 552 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 SPI1P17947 270 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 PAICSP22234 425 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 NTSP30990 170 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 IGFALSP35858 605 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 MAP2K3P46734 347 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 AVPR1BP47901 424 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 ATP12AP54707 1039 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 MAZP56270 477 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 VSX2P58304 361 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 DEFA5Q01523 94 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 GINS1Q14691 196 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 KCNAB1Q14722 419 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 GLYR1Q49A26 553 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 AKIRIN2Q53H80 203 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 BCL2L15Q5TBC7 163 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 OR2G6Q5TZ20 316 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF57Q68EA5 555 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D3GQ6DHY5 549 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D3CQ6IPX1 549 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TMEM88Q6PEY1 159 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 KLBQ86Z14 1044 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 OR4N5Q8IXE1 308 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D3Q8IZP1 549 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 RAB42Q8N4Z0 105 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF655Q8N720 491 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF511Q8NB15 262 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 OR11H7Q8NGC8 314 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 OR8J1Q8NGP2 316 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 CCL4L1Q8NHW4 92 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TRMT10AQ8TBZ6 339 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 NXPE2Q96DL1 559 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 MRPL38Q96DV4 380 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 SFXN2Q96NB2 322 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 FUZQ9BT04 418 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TAPBPLQ9BX59 468 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 SLC17A9Q9BYT1 436 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 DNTTIP1Q9H147 329 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 NKIRAS2Q9NYR9 191 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 HCN3Q9P1Z3 774 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 COMMD3Q9UBI1 195 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 TBC1D29Q9UFV1 150 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 APOBEC3BQ9UH17 382 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 LHX6Q9UPM6 363 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 NTNG1Q9Y2I2 539 aa4.78□□□□□ -1.64
CLDND1-208ENST00000503004 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 LSM2Q9Y333 95 aaKnown RBP4.78□□□□□ -1.64
CLDND1-208ENST00000503004 A0A087WUU8 490 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 A6NIN4 97 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 PSMD9O00233 223 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 LINC01565O15544 149 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 TXNL1O43396 289 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 DNAJB6O75190 326 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 CDRT1O95170 752 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 ZIC2O95409 532 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SCG5P05408 212 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 ASGR2P07307 311 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SLC2A2P11168 524 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 DRD2P14416 443 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 CXCL3P19876 107 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 GRK6P43250 576 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 INPP1P49441 399 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SNRPGP62308 76 aaKnown RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 PPP2CBP62714 309 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 PPP2CAP67775 309 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 HNRNPA0Q13151 305 aaKnown RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 P2RY14Q15391 338 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SYT14P1Q58G82 188 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 TRIQKQ629K1 86 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 C12orf73Q69YU5 71 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 ZCCHC12Q6PEW1 402 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 C19orf48Q6RUI8 117 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 ASB18Q6ZVZ8 466 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 YAF2Q8IY57 180 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 PRSS58Q8IYP2 241 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 WDSUB1Q8N9V3 476 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SLC16A11Q8NCK7 471 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 MORN4Q8NDC4 146 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 DUSP18Q8NEJ0 188 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 BEST4Q8NFU0 473 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 OR2L5Q8NG80 312 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 C9orf43Q8TAL5 461 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 DTD1Q8TEA8 209 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 CPNE4Q96A23 557 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 MS4A3Q96HJ5 214 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 FAIM2Q9BWQ8 316 aa4.78□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms