RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 VGLL1Q99990 258 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 RBM4BQ9BQ04 359 aaKnown RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 TSSK1BQ9BXA7 367 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 TRIM15Q9C019 465 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 ELOVL4Q9GZR5 314 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 GLT8D2Q9H1C3 349 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 PAK1IP1Q9NWT1 392 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 RABL2AQ9UBK7 228 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 COL14A1Q05707 1796 aaKnown RBP4.15□□□□□ -1.74
HMGB1P3-201ENST00000502802 RGPD5Q99666 1765 aa4.15□□□□□ -1.74
HMGB1P3-201ENST00000502802 TNS3Q68CZ2 1445 aa4.15□□□□□ -1.74
HMGB1P3-201ENST00000502802 PHRF1Q9P1Y6 1649 aaKnown RBP4.15□□□□□ -1.74
HMGB1P3-201ENST00000502802 A0A1B0GVL5 298 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 ACOD1A6NK06 481 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 POLR2DO15514 142 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 SCRG1O75711 98 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 IGHV3-13P01766 116 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 SFTPCP11686 197 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 POLR2EP19388 210 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 BCL3P20749 454 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 NF2P35240 595 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 EPS15P42566 896 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 RPL34P49207 117 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 FNTAP49354 379 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 SUCLG1P53597 346 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 ERVPABLB-1P60509 514 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CUL1Q13616 776 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CTSL3PQ5NE16 218 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CEP85LQ5SZL2 805 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 ATL3Q6DD88 541 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 OR2A2Q6IF42 318 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 FAM199XQ6PEV8 388 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CDR2LQ86X02 465 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 TGIF2LXQ8IUE1 241 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 C9orf40Q8IXQ3 194 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZNF440Q8IYI8 595 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 OR1L4Q8NGR5 311 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 SLC2A14Q8TDB8 520 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 ARNTL2Q8WYA1 636 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CELF6Q96J87 481 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 MTMR9Q96QG7 549 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 SLC35A5Q9BS91 424 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CHRDL1Q9BU40 450 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 GPR61Q9BZJ8 451 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 NAT10Q9H0A0 1025 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 CAB39LQ9H9S4 337 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 NANSQ9NR45 359 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZNF639Q9UID6 485 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 PRPF19Q9UMS4 504 aaKnown RBP4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 NPTNQ9Y639 398 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 PRSS21Q9Y6M0 314 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 RALGAPBQ86X10 1494 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 TOPAZ1Q8N9V7 1692 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 TULP4Q9NRJ4 1543 aa4.15□□□□□ -1.75
HMGB1P3-201ENST00000502802 SBNO1A3KN83 1393 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 ANKARQ7Z5J8 1434 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 A8MX80 341 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 B4DXG7 233 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 E9PBE3 544 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 PRKAB2O43741 272 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZNF253O75346 499 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 AP2A1O95782 977 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 NDUFB10O96000 172 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 IGHG4P01861 327 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 HMGB2P26583 209 aaKnown RBP4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 GCAP28676 217 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 YWHABP31946 246 aaKnown RBP4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 UGT1A5P35504 534 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 DUSP3P51452 185 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 EFNA3P52797 238 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 ATP1B3P54709 279 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 PAX2Q02962 417 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 KLRB1Q12918 225 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 C6orf226Q5I0X4 101 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 GFI1BQ5VTD9 330 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 UFSP1Q6NVU6 142 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 METAP1DQ6UB28 335 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 Q6ZTC4 211 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 DHDDSQ86SQ9 333 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 BBS5Q8N3I7 341 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 ATP6V0D2Q8N8Y2 350 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 RASL10AQ92737 203 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 CYP2S1Q96SQ9 504 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZNF670Q9BS34 389 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZNF385DQ9H6B1 395 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 SMYD3Q9H7B4 428 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 VCPKMTQ9H867 229 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 POPDC2Q9HBU9 364 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 NUDT15Q9NV35 164 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 RIMS3Q9UJD0 308 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 IFT52Q9Y366 437 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 TNS1Q9HBL0 1735 aaKnown RBP4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 SBF2Q86WG5 1849 aa4.14□□□□□ -1.75
HMGB1P3-201ENST00000502802 RGPD1P0DJD0 1748 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 BTBD17A6NE02 478 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 E7ESA3 106 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 CABYRO75952 493 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 DIRAS1O95057 198 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 CLDN9O95484 217 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms