RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 MCEEQ96PE7 176 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 MCCC1Q96RQ3 725 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 C19orf43Q9BQ61 176 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 NSRP1Q9H0G5 558 aaKnown RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 CENPHQ9H3R5 247 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 GGA2Q9UJY4 613 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SNX24Q9Y343 169 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 MYH11P35749 1972 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 HCFC1P51610 2035 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SIP14410 1827 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 TRAV9-2A0A087WT02 112 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 TRABD2BA6NFA1 517 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 M0QYV0 167 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 B4GALT5O43286 388 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 TRIM16O95361 564 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 SNAI1O95863 264 aaPredicted RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 HPP00738 406 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF286BP0CG31 522 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 SMIM10L2AP0DMW4 78 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 SMIM10L2BP0DMW5 78 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 MDH1P40925 334 aaKnown RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 HTR5AP47898 357 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 PGFP49763 221 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 ARHGDIAP52565 204 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 IST1P53990 364 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 LMO4P61968 165 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 MRPS25P82663 173 aaKnown RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 ZP4Q12836 540 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 CNPY1Q3B7I2 92 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 BOLA3Q53S33 107 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 MS4A13Q5J8X5 152 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 MFSD14CQ5VZR4 134 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 CCBE1Q6UXH8 406 aaPredicted RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF562Q6V9R5 426 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 SCARA5Q6ZMJ2 495 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 CENPUQ71F23 418 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 BZW1Q7L1Q6 419 aaKnown RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 ARCQ7LC44 396 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 TSEN54Q7Z6J9 526 aaKnown RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 NAXDQ8IW45 347 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 PIWIL1Q96J94 861 aaKnown RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 RANBP9Q96S59 729 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 CNPY3Q9BT09 278 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 AMBNQ9NP70 447 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 ACP6Q9NPH0 428 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 DCAF13Q9NV06 445 aaKnown RBP4.86□□□□□ -1.63
NEDD4-203ENST00000502612 TAS2R3Q9NYW6 316 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 SENP1Q9P0U3 644 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 LRRC37A2A6NM11 1700 aa4.86□□□□□ -1.63
NEDD4-203ENST00000502612 OTOFQ9HC10 1997 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 IGHV3OR16-12A0A075B7B8 117 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 hCG_1818297A0A087WSY0 165 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 NPIPA5A0A0B4J1W7 369 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 FAM230AA0A1W2PPH8 454 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 MBLAC1A4D2B0 266 aaPredicted RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 GMNCA6NCL1 334 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 MFSD2BA6NFX1 497 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 CCT8L1PA6NM43 557 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 A8MXQ7 604 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 E9PAM4 449 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 NPIPA5E9PKD4 350 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 GOLGA8SH3BPF8 625 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 APOC4-APOC2K7ER74 178 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 SGK1O00141 431 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 PDLIM1O00151 329 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 DNALI1O14645 258 aaPredicted RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 RIPK2O43353 540 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF354AO60765 605 aaPredicted RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 HUS1O60921 280 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 CDH16O75309 829 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 SPAG6O75602 509 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 NDUFA7O95182 113 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 TTC4O95801 387 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 NUDT14O95848 222 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 FAM107AO95990 144 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 APOC2P02655 101 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 FAM200BP0CF97 657 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 SDC4P31431 198 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ELK3P41970 407 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 MARCKSL1P49006 195 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 TAF6P49848 677 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 DSCR10P59022 87 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 HERVK_113P63132 956 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ERVK-8P63133 956 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 MRPS6P82932 125 aaKnown RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 BST2Q10589 180 aaKnown RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 BNIP1Q12981 228 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 PTPN20Q4JDL3 420 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 SLC22A6Q4U2R8 563 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 TTMPQ5BVD1 217 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 KCTD16Q68DU8 428 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 DMKNQ6E0U4 476 aaPredicted RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 HACD2Q6Y1H2 254 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 CEACAM19Q7Z692 300 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 PSTKQ8IV42 348 aaKnown RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ALLCQ8N6M5 410 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 C1orf54Q8WWF1 131 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 DNAJA3Q96EY1 480 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 CPB2Q96IY4 423 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 HSFY1Q96LI6 401 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms