RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	MMP21	Q8N119	569 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	CADM3	Q8N126	398 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	MREG	Q8N565	214 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	FBXO30	Q8TB52	745 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	DOK4	Q8TEW6	326 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	ST8SIA1	Q92185	356 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	JADE3	Q92613	823 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	TUBGCP3	Q96CW5	907 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	COQ8B	Q96D53	544 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	RADIL	Q96JH8	1075 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	ATP6V1G3	Q96LB4	118 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	CEP19	Q96LK0	163 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	TSSK3	Q96PN8	268 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	KCNA7	Q96RP8	456 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	COQ7	Q99807	217 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	GATA5	Q9BWX5	397 aa	Predicted RBP	6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	PINK1	Q9BXM7	581 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	ARMC7	Q9H6L4	198 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	MOV10	Q9HCE1	1003 aa	Known RBP	6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	TBCCD1	Q9NVR7	557 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	MED11	Q9P086	117 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	NDUFA13	Q9P0J0	144 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	KIF17	Q9P2E2	1029 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	KLHL9	Q9P2J3	617 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	CLEC4A	Q9UMR7	237 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	SLC35A3	Q9Y2D2	325 aa		6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	RPH3A	Q9Y2J0	694 aa	Predicted RBP	6.24	□□□□□ -1.41
BBS9-215	ENST00000498189	DOCK7	Q96N67	2140 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189		A0A0G2JPF8	293 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	FAM234B	A2RU67	622 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	SMIM23	A6NLE4	172 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HNRNPCL3	B7ZW38	293 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189		J3KRW8	73 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	GPR171	O14626	319 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	RGS16	O15492	202 aa	Predicted RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	CFLAR	O15519	480 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	SEC14L5	O43304	696 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	MGRN1	O60291	552 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	STX11	O75558	287 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	ATE1	O95260	518 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	SLU7	O95391	586 aa	Known RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	NUDT14	O95848	222 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HRG	P04196	525 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	SERPINE1	P05121	402 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HMGN2	P05204	90 aa	Known RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	LINC00032	P0C843	101 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HNRNPCL4	P0DMR1	293 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	PGC	P20142	388 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	KLK2	P20151	261 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	PSMB1	P20618	241 aa	Known RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	SLC7A1	P30825	629 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HTR3A	P46098	478 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	RFX3	P48380	749 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	CLDN8	P56748	225 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	B3GALT5-AS1	P59052	145 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	VBP1	P61758	197 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	DUSP2	Q05923	314 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	STX5	Q13190	355 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	BLMH	Q13867	455 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	CYLC2	Q14093	348 aa	Predicted RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	ACKR1	Q16570	336 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	TMEM44	Q2T9K0	475 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	RFTN2	Q52LD8	501 aa	Predicted RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	IGSF11	Q5DX21	431 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	XKR7	Q5GH72	579 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	DCST1	Q5T197	706 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	IL23R	Q5VWK5	629 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HBM	Q6B0K9	141 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	CLEC6A	Q6EIG7	209 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	OR5M10	Q6IEU7	315 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	OR7E24	Q6IFN5	339 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	FAM180B	Q6P0A1	224 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	C3orf33	Q6P1S2	294 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189		Q6ZSR9	355 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	PLEKHM3	Q6ZWE6	761 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	RHOU	Q7L0Q8	258 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	ZNF551	Q7Z340	670 aa	Predicted RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	MARCH3	Q86UD3	253 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	UBQLNL	Q8IYU4	475 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	C4orf33	Q8N1A6	199 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	OR8J2	Q8NGG1	315 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	OR5W2	Q8NH69	310 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	OR2V1	Q8NHB1	315 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	RAB3IL1	Q8TBN0	382 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	PHOSPHO1	Q8TCT1	267 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	WDR60	Q8WVS4	1066 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HSD17B8	Q92506	261 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	STARD4	Q96DR4	205 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	ARSG	Q96EG1	525 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	TRMT61A	Q96FX7	289 aa	Known RBP	6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	KLHL15	Q96M94	604 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	HS6ST2	Q96MM7	605 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	ZBTB18	Q99592	522 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	DUSP26	Q9BV47	211 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	TPK1	Q9H3S4	243 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	PLEKHF2	Q9H8W4	249 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	EQTN	Q9NQ60	294 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	MED17	Q9NVC6	651 aa		6.23	□□□□□ -1.41
BBS9-215	ENST00000498189	FAIM	Q9NVQ4	179 aa		6.23	□□□□□ -1.41

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