RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TMEM239Q8WW34 195 aa19.58■□□□□ 0.73
C9orf3-222ENST00000496567 WDYHV1Q96HA8 205 aa19.58■□□□□ 0.73
C9orf3-222ENST00000496567 OR5B2Q96R09 309 aa19.58■□□□□ 0.73
C9orf3-222ENST00000496567 OR11A1Q9GZK7 315 aa19.58■□□□□ 0.73
C9orf3-222ENST00000496567 PRDM14Q9GZV8 571 aa19.58■□□□□ 0.73
C9orf3-222ENST00000496567 REEP1Q9H902 201 aa19.58■□□□□ 0.73
C9orf3-222ENST00000496567 KALRNO60229 2985 aa19.58■□□□□ 0.72
C9orf3-222ENST00000496567 EIF1AYO14602 144 aaKnown RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 NPIPB7O75200 414 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 DEAF1O75398 565 aaPredicted RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 TIPRLO75663 272 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 RPS3AP61247 264 aaKnown RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 SRYQ05066 204 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 C1orf140Q5VVS0 124 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 RRM2BQ7LG56 351 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 PRICKLE2Q7Z3G6 844 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 FGD2Q7Z6J4 655 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 OR52J3Q8NH60 311 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 TMEM255BQ8WV15 326 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 ACOT11Q8WXI4 607 aaPredicted RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 PAQR5Q9NXK6 330 aaPredicted RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 DNAJB9Q9UBS3 223 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 CAMK2AQ9UQM7 478 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 MED12Q93074 2177 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 SVILO95425 2214 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 IGKV1D-42A0A075B6H8 117 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 A0A0J9YW62 118 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 ZC3H12DA2A288 527 aaKnown RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 FASP25445 335 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 SHC1P29353 583 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 HMGA2P52926 109 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 SUCLG1P53597 346 aaKnown RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 EGR4Q05215 589 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 GK3PQ14409 553 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 CHMP1BQ7LBR1 199 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 RNF113BQ8IZP6 322 aaKnown RBP19.57■□□□□ 0.72
C9orf3-222ENST00000496567 OR2V1Q8NHB1 315 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 FAM57AQ8TBR7 257 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 SLC7A13Q8TCU3 470 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 ARL5BQ96KC2 179 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 KLHL4Q9C0H6 718 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 TIGARQ9NQ88 270 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 TMCC3Q9ULS5 477 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 MED31Q9Y3C7 131 aa19.57■□□□□ 0.72
C9orf3-222ENST00000496567 TRAV36DV7A0A075B6V5 113 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 H0Y3Z8 333 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 TNFRSF11BO00300 401 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 TNFSF11O14788 317 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 CLOCKO15516 846 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 OR2T1O43869 369 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 C1QL1O75973 258 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 AHSA1O95433 338 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 TPOP07202 933 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 IDUAP35475 653 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 TLE1Q04724 770 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 MYBPHQ13203 477 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 SF3B4Q15427 424 aaKnown RBP eCLIP19.56■□□□□ 0.722e-8■■□□□ 13.8
C9orf3-222ENST00000496567 CTU2Q2VPK5 515 aaKnown RBP19.56■□□□□ 0.72
C9orf3-222ENST00000496567 GXYLT1Q4G148 440 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 HBMQ6B0K9 141 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 ZNF730Q6ZMV8 503 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 TMPPEQ6ZT21 453 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 ADGRG7Q96K78 797 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 ALPK1Q96QP1 1244 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 S100A14Q9HCY8 104 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 TRAPPC4Q9Y296 219 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 SAMHD1Q9Y3Z3 626 aaKnown RBP19.56■□□□□ 0.72
C9orf3-222ENST00000496567 LYVE1Q9Y5Y7 322 aa19.56■□□□□ 0.72
C9orf3-222ENST00000496567 A0A087WUU8 490 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 A0A1W2PNR3 127 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 HTR3EA5X5Y0 456 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 AHRRA9YTQ3 701 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 H0YC42 278 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 SULT2B1O00204 365 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 PRRG2O14669 202 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 ZNHIT1O43257 154 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 PMS2P2O95744 297 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 LDLRP01130 860 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 FUT4P22083 530 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 TPD52P55327 224 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-222ENST00000496567 CLDN15P56746 228 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 CARD18P57730 90 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 CSNK2A1P68400 391 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-222ENST00000496567 PODNL1Q6PEZ8 512 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 OR5M9Q8NGP3 310 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 MIB2Q96AX9 1013 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 KTI12Q96EK9 354 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-222ENST00000496567 ZNF835Q9Y2P0 537 aa19.55■□□□□ 0.72
C9orf3-222ENST00000496567 TRBV4-1A0A0J9YWV2 114 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 SLC19A2O60779 497 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 IGF2P01344 180 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 GABRA1P14867 456 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 PTNP21246 168 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 EIF1AXP47813 144 aaKnown RBP19.54■□□□□ 0.72
C9orf3-222ENST00000496567 DIO1P49895 249 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 UGT2B15P54855 530 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 ATP6AP1Q15904 470 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 C3AR1Q16581 482 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 SGCBQ16585 318 aa19.54■□□□□ 0.72
C9orf3-222ENST00000496567 FAM69AQ5T7M9 428 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms