RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TRIM13O60858 407 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 KRT33AO76009 404 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 ERCC1P07992 297 aaPredicted RBP12.45□□□□□ -0.42
VARS-228ENST00000495010 PRPS1L1P21108 318 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 MPGP29372 298 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 SLC35A1P78382 337 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 SLC25A3Q00325 362 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 MST1LQ2TV78 715 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 FAM153CQ494X1 144 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 ATAD3BQ5T9A4 648 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 C6orf120Q7Z4R8 191 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 ABHD12BQ7Z5M8 362 aaPredicted RBP12.45□□□□□ -0.42
VARS-228ENST00000495010 IFT20Q8IY31 132 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 ANKS4BQ8N8V4 417 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 DDIT4LQ96D03 193 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 COQ8BQ96D53 544 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 GATA5Q9BWX5 397 aaPredicted RBP12.45□□□□□ -0.42
VARS-228ENST00000495010 OR11A1Q9GZK7 315 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 BPESC1Q9GZL8 116 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 GIMAP2Q9UG22 337 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 KCNE5Q9UJ90 142 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 TRAPPC4Q9Y296 219 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 FLVCR1Q9Y5Y0 555 aa12.45□□□□□ -0.42
VARS-228ENST00000495010 TMEM233B4DJY2 109 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 B9A039 149 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 PDLIM1O00151 329 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 KLF11O14901 512 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 SNUPNO95149 360 aaKnown RBP12.44□□□□□ -0.42
VARS-228ENST00000495010 AGR2O95994 175 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 CRYAAP02489 173 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 FGF4P08620 206 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 PGM1P36871 562 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 HTR3AP46098 478 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 CHN2P52757 468 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 HBA1P69905 142 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 PGS1Q32NB8 556 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 IL23RQ5VWK5 629 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 OLIG3Q7RTU3 272 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 ARFGAP2Q8N6H7 521 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 KRTCAP2Q8N6L1 136 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 FNDC5Q8NAU1 212 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 AGR3Q8TD06 166 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 ZNF350Q9GZX5 532 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 ADAM19Q9H013 955 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 OBP2BQ9NPH6 170 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
VARS-228ENST00000495010 FBXO9Q9UK97 447 aaPredicted RBP12.44□□□□□ -0.42
VARS-228ENST00000495010 PCDHGB4Q9UN71 923 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 WDR45Q9Y484 360 aa12.44□□□□□ -0.42
VARS-228ENST00000495010 CENPVL1A0A0U1RR11 272 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 RNF103-CHMP3A0A140T963 221 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 LRP5LA4QPB2 252 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 VSTM5A8MXK1 200 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 SKAP2O75563 359 aaPredicted RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 SLU7O95391 586 aaKnown RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 ITGA2P17301 1181 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 PAX7P23759 505 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 IDH2P48735 452 aaKnown RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 UBE2NP61088 152 aaKnown RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 HPCAP84074 193 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 HIKESHIQ53FT3 197 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 VHLLQ6RSH7 139 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 AAED1Q7RTV5 226 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 ADGRG3Q86Y34 549 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 LINC01356Q8N9X3 169 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 POMGNT2Q8NAT1 580 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 XAGE5Q8WWM1 108 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 OIT3Q8WWZ8 545 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 PMM1Q92871 262 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 C1orf159Q96HA4 380 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 SLC38A2Q96QD8 506 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 OR51I1Q9H343 314 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 OCEL1Q9H607 264 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 CA10Q9NS85 328 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.43□□□□□ -0.42
VARS-228ENST00000495010 TMEM45AQ9NWC5 275 aa12.43□□□□□ -0.42
VARS-228ENST00000495010 TMED7-TICAM2A0A0A6YYA0 188 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 IGHV1-18A0A0C4DH31 117 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 SMIM23A6NLE4 172 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 STAMBPO95630 424 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 CHRNGP07510 517 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 OR4A8P0C604 315 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 OR12D1P0DN82 309 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 KRT4P19013 534 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 APEX1P27695 318 aaKnown RBP12.42□□□□□ -0.42
VARS-228ENST00000495010 SLC1A3P43003 542 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 POLR2HP52434 150 aaKnown RBP12.42□□□□□ -0.42
VARS-228ENST00000495010 H3F3AP84243 136 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 SLC17A1Q14916 467 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 PCLAFQ15004 111 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 MAPK14Q16539 360 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 UGT3A2Q3SY77 523 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 C6orf136Q5SQH8 315 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 OTUD3Q5T2D3 398 aaPredicted RBP12.42□□□□□ -0.42
VARS-228ENST00000495010 EMBQ6PCB8 327 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms