RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DNAJC14Q6Y2X3 702 aaPredicted RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 LRRC74BQ6ZQY2 392 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 ADGRG3Q86Y34 549 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 PEX5LQ8IYB4 626 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF440Q8IYI8 595 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 OR9I1Q8NGQ6 314 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 WDR60Q8WVS4 1066 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 RADILQ96JH8 1075 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 OR52B2Q96RD2 323 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 RSPO3Q9BXY4 272 aaPredicted RBP11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 RMND5AQ9H871 391 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 PARPBPQ9NWS1 579 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 ASB6Q9NWX5 421 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 NKIRAS1Q9NYS0 192 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 CALML5Q9NZT1 146 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 TMEM181Q9P2C4 612 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 PRDM4Q9UKN5 801 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 TRAPPC4Q9Y296 219 aa11.84□□□□□ -0.51
CTDSP1-212ENST00000494067 IGKV3D-15A0A087WSY6 115 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 TMED7-TICAM2A0A0A6YYA0 188 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 AGAP5A6NIR3 686 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 ZNF716A6NP11 495 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 ZNF208O43345 1280 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 DBIP07108 87 aaKnown RBP11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 IDO1P14902 403 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 FOXG1P55316 489 aaPredicted RBP11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 SLC35A1P78382 337 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 VEZF1Q14119 521 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 CLEC12BQ2HXU8 276 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 BEND6Q5SZJ8 279 aaPredicted RBP11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 TMEM108Q6UXF1 575 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 VPS33AQ96AX1 596 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 AURKBQ96GD4 344 aaPredicted RBP11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 ARMC7Q9H6L4 198 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 P2RX2Q9UBL9 471 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 UPB1Q9UBR1 384 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 POU2F3Q9UKI9 436 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 MGAT4BQ9UQ53 548 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 TMED7Q9Y3B3 224 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 CHST2Q9Y4C5 530 aa11.83□□□□□ -0.52
CTDSP1-212ENST00000494067 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 ZC3H12DA2A288 527 aaKnown RBP11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 FAM234BA2RU67 622 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 DPRXA6NFQ7 191 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 CFAP73A6NFT4 308 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 OR5H1A6NKK0 313 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 SLC22A3O75751 556 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 RAD51DO75771 328 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 PGM3O95394 542 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 IMPDH2P12268 514 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 PCSK6P29122 969 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 TACR3P29371 465 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 COPZ1P61923 177 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 GSTA3Q16772 222 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 AGAP6Q5VW22 663 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 OR7E24Q6IFN5 339 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 CCDC103Q8IW40 242 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 KBTBD8Q8NFY9 601 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 HS6ST2Q96MM7 605 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 BARX1Q9HBU1 254 aaPredicted RBP11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 THUMPD1Q9NXG2 353 aaKnown RBP11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 TAS2R16Q9NYV7 291 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 NPAP1Q9NZP6 1156 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 SLC9A8Q9Y2E8 581 aa11.82□□□□□ -0.52
CTDSP1-212ENST00000494067 TMEM72A0PK05 275 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 FAAHO00519 579 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 ERLIN1O75477 346 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 IGHV3-9P01782 118 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 ETFAP13804 333 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 HOXB9P17482 250 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 COX5AP20674 150 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 CXCR1P25024 350 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 SLC1A3P43003 542 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 CRATP43155 626 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 SLC16A1P53985 500 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 CRISP3P54108 245 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 SLC18A1P54219 525 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 CDH11P55287 796 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 TGFBR3Q03167 851 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 FAPQ12884 760 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 ZSWIM7Q19AV6 140 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 RPS26P11Q5JNZ5 115 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 MRPL2Q5T653 305 aaKnown RBP11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 CASP12Q6UXS9 341 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 VRK2Q86Y07 508 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 ZNF433Q8N7K0 673 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 OR52N5Q8NH56 324 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 OR52P1PQ8NH57 321 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 TAPBPLQ9BX59 468 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 MANSC1Q9H8J5 431 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 OSGIN1Q9UJX0 560 aa11.81□□□□□ -0.52
CTDSP1-212ENST00000494067 MAGED1Q9Y5V3 778 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms