RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 KHKP50053 298 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 SLC16A1P53985 500 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 NME5P56597 212 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 OR2B6P58173 313 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 HPCAP84074 193 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 RAB35Q15286 201 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 GABRA6Q16445 453 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 GPAT3Q53EU6 434 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 SPANXN4Q5MJ08 99 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 SAXO2Q658L1 398 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 OR7E24Q6IFN5 339 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 CLEC2AQ6UVW9 174 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 FRRS1Q6ZNA5 592 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 ADGRG3Q86Y34 549 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 CCDC103Q8IW40 242 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 FBXL14Q8N1E6 418 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 DEPDC4Q8N2C3 294 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 MUC15Q8N387 334 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 ARFGAP2Q8N6H7 521 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 HTRA1Q92743 480 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 DHRS9Q9BPW9 319 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 SLC35A5Q9BS91 424 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 TMEM109Q9BVC6 243 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 PARD6BQ9BYG5 372 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 CENPHQ9H3R5 247 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 EXOSC3Q9NQT5 275 aaKnown RBP9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 MARCOQ9UEW3 520 aaPredicted RBP9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 ALPK2Q86TB3 2170 aa9.03□□□□□ -0.96
NUDCD3-210ENST00000493613 MALRD1Q5VYJ5 2156 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 PRAMEF27A3QJZ7 478 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 RNF212BA8MTL3 300 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 E9PBE3 544 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 AP3D1O14617 1153 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 C1QCP02747 245 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 ITGA5P08648 1049 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 LBPP18428 481 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 BGNP21810 368 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 S100A3P33764 101 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 HTR3AP46098 478 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 IDH2P48735 452 aaKnown RBP9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 FABP6P51161 128 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 FOXG1P55316 489 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 DSCR9P59020 149 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 KCNJ10P78508 379 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 H3F3AP84243 136 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 PLAURQ03405 335 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 CASP8Q14790 479 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 FAM174BQ3ZCQ3 159 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 C6orf52Q5T4I8 152 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 C9orf135Q5VTT2 229 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 AP1ARQ63HQ0 302 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 CASP12Q6UXS9 341 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 B3GLCTQ6Y288 498 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 LSRQ86X29 649 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 RNF130Q86XS8 419 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 ZNF525Q8N782 197 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 OR10H5Q8NGA6 315 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 OR52E4Q8NGH9 312 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 CNOT9Q92600 299 aaKnown RBP9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 TESCQ96BS2 214 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 DDIT4LQ96D03 193 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 NEURL3Q96EH8 262 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 TEX37Q96LM6 180 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 MUS81Q96NY9 551 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 SORT1Q99523 831 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 INPP5KQ9BT40 448 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 C1QTNF6Q9BXI9 259 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 KCNK9Q9NPC2 374 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 PNPOQ9NVS9 261 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 TMEM181Q9P2C4 612 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 UPB1Q9UBR1 384 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 TRAPPC4Q9Y296 219 aa9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-210ENST00000493613 A0A096LNT2 108 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 TMED7-TICAM2A0A0A6YYA0 188 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 CCDC154A6NI56 674 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 H7C417 338 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 HMGN4O00479 90 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 TM9SF1O15321 606 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 EIF1BO60739 113 aaKnown RBP9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 SNUPNO95149 360 aaKnown RBP9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 POLR2HP52434 150 aaKnown RBP9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 CLNS1AP54105 237 aaKnown RBP9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 UFM1P61960 85 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 SLC35A1P78382 337 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 STX3Q13277 289 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 MPP2Q14168 576 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 SYPL1Q16563 259 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 DPY19L1Q2PZI1 675 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 TMEM249Q2WGJ8 235 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 ZNF544Q6NX49 715 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 PHC2Q8IXK0 858 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 ANKFN1Q8N957 763 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 FAM168AQ92567 244 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 PMM1Q92871 262 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 CCDC115Q96NT0 180 aa9.01□□□□□ -0.97
NUDCD3-210ENST00000493613 PANX1Q96RD7 426 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms