RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ZC3H12DA2A288 527 aaKnown RBP15.48■□□□□ 0.07
LIME1-208ENST00000493265 H0YHG0 523 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 AQP7O14520 342 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 EIF1AYO14602 144 aaKnown RBP15.48■□□□□ 0.07
LIME1-208ENST00000493265 KRT36O76013 467 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 ACTL6AO96019 429 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 LHX2P50458 406 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 DLX5P56178 289 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 RAC1P63000 192 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 ELF3P78545 371 aaPredicted RBP15.48■□□□□ 0.07
LIME1-208ENST00000493265 CRYZQ08257 329 aaKnown RBP15.48■□□□□ 0.07
LIME1-208ENST00000493265 SWT1Q5T5J6 900 aaKnown RBP15.48■□□□□ 0.07
LIME1-208ENST00000493265 VASNQ6EMK4 673 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 OR2T5Q6IEZ7 315 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 ARHGAP11AQ6P4F7 1023 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 TTC33Q6PID6 262 aaPredicted RBP15.48■□□□□ 0.07
LIME1-208ENST00000493265 PIK3C3Q8NEB9 887 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 OR2T29Q8NH02 315 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 DDIT4LQ96D03 193 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 OR5B2Q96R09 309 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 TIMP4Q99727 224 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 PRSS27Q9BQR3 290 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 MAN2C1Q9NTJ4 1040 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 VNN3Q9NY84 501 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 STOML1Q9UBI4 398 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 AP4B1Q9Y6B7 739 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 U3KQV3 271 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 MYO9AB2RTY4 2548 aa15.48■□□□□ 0.07
LIME1-208ENST00000493265 ESPL1Q14674 2120 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 TRBV4-1A0A0J9YWV2 114 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 A0A1B0GVC2 190 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 LINC01387J3KSC0 135 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 TNFRSF11BO00300 401 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 TNFSF11O14788 317 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 HNRNPRO43390 633 aaKnown RBP15.47■□□□□ 0.07
LIME1-208ENST00000493265 PIP5K1CO60331 668 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 RNF224P0DH78 156 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 THRBP10828 461 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 ABOP16442 354 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 HOXB6P17509 224 aaKnown RBP15.47■□□□□ 0.07
LIME1-208ENST00000493265 CBLP22681 906 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 PTGS2P35354 604 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 SUCLG1P53597 346 aaKnown RBP15.47■□□□□ 0.07
LIME1-208ENST00000493265 SMIM11AP58511 58 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 SYT14P1Q58G82 188 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 C1QL3Q5VWW1 255 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 PPP4R4Q6NUP7 873 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 TBPL2Q6SJ96 375 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 ZNF730Q6ZMV8 503 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 FGD2Q7Z6J4 655 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 AMIGO2Q86SJ2 522 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 C10orf53Q8N6V4 93 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 SSC4DQ8WTU2 575 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 LRTOMTQ8WZ04 291 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 SARAFQ96BY9 339 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 DUS3LQ96G46 650 aaKnown RBP15.47■□□□□ 0.07
LIME1-208ENST00000493265 MPP4Q96JB8 637 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 KLHL15Q96M94 604 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 REEP1Q9H902 201 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 C12orf10Q9HB07 376 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 S100A14Q9HCY8 104 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 PLSCR2Q9NRY7 297 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 ARMC1Q9NVT9 282 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 PRDM4Q9UKN5 801 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 TMCC3Q9ULS5 477 aa15.47■□□□□ 0.07
LIME1-208ENST00000493265 SAMHD1Q9Y3Z3 626 aaKnown RBP15.47■□□□□ 0.07
LIME1-208ENST00000493265 IGKV1D-42A0A075B6H8 117 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 A0A0J9YW62 118 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 A1L4Q6 167 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 GJE1A6NN92 205 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 A8MVM7 634 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 H0Y3Z8 333 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 H3BNX3 289 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 ADAMDEC1O15204 470 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 CLOCKO15516 846 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 E2F6O75461 281 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 BAG2O95816 211 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 TPOP07202 933 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 FASP25445 335 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 RPS5P46782 204 aaKnown RBP15.46■□□□□ 0.07
LIME1-208ENST00000493265 EIF1AXP47813 144 aaKnown RBP15.46■□□□□ 0.07
LIME1-208ENST00000493265 IST1P53990 364 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 UGT2B15P54855 530 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 LSM11P83369 360 aaKnown RBP eCLIP15.46■□□□□ 0.07
LIME1-208ENST00000493265 LAPTM4AQ15012 233 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 EXOC3L2Q2M3D2 409 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 NHSL2Q5HYW2 709 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 C1orf140Q5VVS0 124 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 ZFP1Q6P2D0 407 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 PODNL1Q6PEZ8 512 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 RRM2BQ7LG56 351 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 GGNQ86UU5 652 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 MEX3DQ86XN8 651 aaKnown RBP15.46■□□□□ 0.07
LIME1-208ENST00000493265 MEIOBQ8N635 442 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 PFN4Q8NHR9 129 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 SLC25A43Q8WUT9 341 aaPredicted RBP15.46■□□□□ 0.07
LIME1-208ENST00000493265 TMEM239Q8WW34 195 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 KTI12Q96EK9 354 aaPredicted RBP15.46■□□□□ 0.07
LIME1-208ENST00000493265 ARL5BQ96KC2 179 aa15.46■□□□□ 0.07
LIME1-208ENST00000493265 ALPK1Q96QP1 1244 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms