RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TRIM44	Q96DX7	344 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC38A2	Q96QD8	506 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	FRG2B	Q96QU4	278 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	BBS4	Q96RK4	519 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	MRI1	Q9BV20	369 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	KATNB1	Q9BVA0	655 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF717	Q9BY31	904 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	MRPL46	Q9H2W6	279 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	MS4A5	Q9H3V2	200 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	TOR3A	Q9H497	397 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF442	Q9H7R0	627 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	NOL11	Q9H8H0	719 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	DDX31	Q9H8H2	851 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	BRF2	Q9HAW0	419 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C3orf14	Q9HBI5	128 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	MMP26	Q9NRE1	261 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	TAS2R9	Q9NYW1	312 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	VPS29	Q9UBQ0	182 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	DCDC2	Q9UHG0	476 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF639	Q9UID6	485 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PURG	Q9UJV8	347 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ABCG2	Q9UNQ0	655 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC12A4	Q9UP95	1085 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	OR10H1	Q9Y4A9	318 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ABCA13	Q86UQ4	5058 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	STARD9	Q9P2P6	4700 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PPIAL4E	A0A075B759	164 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	PPIAL4C	A0A0B4J2A2	164 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	EXOC1L	A0A1B0GW35	172 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602		A0A1W2PRB8	838 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	OR6C65	A6NJZ3	312 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602		E9PQ18	207 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	PPIAL4D	F5H284	164 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	POC1B-GALNT4	F8VUJ3	575 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	STX16-NPEPL1	H3BU86	382 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602		M0R233	179 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	STX16	O14662	325 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	SYNGR3	O43761	229 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	CYTIP	O60759	359 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	RP2	O75695	350 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	GSN	P06396	782 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	PPIAL4F	P0DN26	164 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	HSD3B1	P14060	373 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	HPGD	P15428	266 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	IGLL1	P15814	213 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	PCSK2	P16519	638 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	HSD3B2	P26439	372 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	HMOX2	P30519	316 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	CALCR	P30988	508 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	MSX2	P35548	267 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ALDH9A1	P49189	494 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF41	P51814	821 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	SEC24C	P53992	1094 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	RPL15	P61313	204 aa	Known RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	NAAA	Q02083	359 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	TGFBR3	Q03167	851 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	HGFAC	Q04756	655 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	EGR3	Q06889	387 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ACSM2A	Q08AH3	577 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	C2orf54	Q08AI8	447 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	HERPUD1	Q15011	391 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	LTB4R	Q15722	352 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	IMPG1	Q17R60	797 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	PLPPR5	Q32ZL2	321 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	VPS26B	Q4G0F5	336 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	SPIN4	Q56A73	249 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ACSM2B	Q68CK6	577 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ZFAND6	Q6FIF0	208 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	MRM1	Q6IN84	353 aa	Known RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ANKRD16	Q6P6B7	361 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602		Q6ZSV7	163 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	RPS27L	Q71UM5	84 aa	Known RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	GOLGA7	Q7Z5G4	137 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ADGRG3	Q86Y34	549 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	NUP37	Q8NFH4	326 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	OR4S1	Q8NGB4	309 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	KIF18A	Q8NI77	898 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	POC1B	Q8TC44	478 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	METTL6	Q8TCB7	284 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ST7L	Q8TDW4	575 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	DYRK2	Q92630	601 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	KLHL29	Q96CT2	875 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ARL5B	Q96KC2	179 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	FMO2	Q99518	471 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	GAL3ST1	Q99999	423 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	TBL1XR1	Q9BZK7	514 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	ANKRA2	Q9H9E1	313 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	MED17	Q9NVC6	651 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	UPB1	Q9UBR1	384 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	MALT1	Q9UDY8	824 aa		4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	LEF1	Q9UJU2	399 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	NOSIP	Q9Y314	301 aa	Known RBP	4.57	□□□□□ -1.68
SEC13-219	ENST00000492602	UBR4	Q5T4S7	5183 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	IGLV3-32	A0A0A0MS00	114 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602		A0A0A6YYD5	115 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	TRAV40	A0A0B4J280	105 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms